Gene Bamb_5372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5372 
Symbol 
ID4314261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2417162 
End bp2418607 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content74% 
IMG OID638153213 
ProductBFD/(2Fe-2S)-binding domain-containing protein 
Protein accessionYP_777253 
Protein GI115360115 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.420802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGACG CACTGCGACC GGTGATCGTC GGCGCGGGGC CGGCCGGCGT GCGCGCGGCC 
GAGGCGCTGG TCGACGCGGG GCTGCGCCCT GTCGTGATCG ACGAGAACGC GCGCTGGGGC
GGCCAGATCT ACCGGCAGCC GCCGGTCGAC GGCGCGTTCG CCCGCGGCAA GCGTGCGCTG
TACGGCTTCG AGGCCGCGAA GGCGGACGCC GTGCACCGGA CGATGGCCGC GCTGCTGCCA
CGAGTCGACT ATCGGCCGAA CACGCTCGCC TGGGCATGCG GCGCGGGCCG CGTCGACACG
CTGCAGGACG GTCGCGAAAC GACCGTGCCG TTCTCGCACC TGATCATCGC GAGCGGCGCG
ACCGATCGCA TGCTGCCGGT GCCGGGCTGG ACGCTTGCCG GCGTCTATAC GCTCGGCGGC
GCACAGGTCG CGCTGAAGTC GCAGGGCTGC GCGATCGGCA GTCGCATCGT GTTCGCGGGC
ACCGGGCCGT TGCTGTATCT CGTCGCTTAC CAGTACGCGA AGGCCGGCGC GCAGGTCGCG
GCGGTGCTCG ACACGAGCCC GCTGCGCCGG CAGGCGGCCG CGACACCGGC GCTGCTGCGC
ATGCCGGCGA CCTTCGCGAA GGGGCTGTAT TACATCGGCT GGCTGCGCGC GCACGGCGTC
GCGATCGAAA CGGGCGTCAC GCTCGAACGC GTACTCGGCG AGCGGCACGT CACCGGCCTC
GCGTGGCGCG CGGCCGGTAG CGATGCGCCG CCGCGCCGGA TCGACTGCGA TGCGCTCGGC
CTCGGCTTCG GGTTGCGTTC GGAAACGCAG CTTGCCGATC TCGCCGGCTG CCGGTTCCGT
TTCGATCCGC TCAATCACGC ATGGCTGCCG GAACGCGATG CGGCCGGTCG CACGTCGGTG
CGCGGCCTCT ACGTCGCGGG CGACGGCGCC GGCATCGCGG GGGCCGATGC GGCCGAGGCG
TCCGGGCGAC GCGCGGCACT CGCGCTGCTC GACGACGCGG GCATCGCGAC GTCATCGTCA
TCGCCATTGC CGGCCGGCAA GCCCGATGCG GCCGCGCTGG ACCGCACGCT CGCCCGGTTT
GGCGCATTCC GCGCGGGCCT AGAGGCGGCG TTCGCGCCGC CGCCCGAGCT CCCCGCACGC
TGCCCGGACG ACACGATCGT GTGCCGCTGC GAGGAGATCG ACGCGGGCAC GCTGCGGCGC
TGCATCCGCG ACGGCGCGGC CACCGAGCTG AACCGGCTGA AGGCGCTGAC GCGCGCCGGG
ATGGGCCGCT GCCAGGGCCG CATGTGCGGC GACGCGACCG CTCTCGTGCT GGCCGCCGAA
ACCGGCCGCC CGCTCGCGGA CGTCGGTCGG TTGCGCGCGC AACCACCTGT GAAGCCGTTC
CCGATCTCGG CCGCGCTCGC GGGCGACGAC GTCGCGGCGA TTCCCGACGA GGCGCGCGAT
GAGTGA
 
Protein sequence
MSDALRPVIV GAGPAGVRAA EALVDAGLRP VVIDENARWG GQIYRQPPVD GAFARGKRAL 
YGFEAAKADA VHRTMAALLP RVDYRPNTLA WACGAGRVDT LQDGRETTVP FSHLIIASGA
TDRMLPVPGW TLAGVYTLGG AQVALKSQGC AIGSRIVFAG TGPLLYLVAY QYAKAGAQVA
AVLDTSPLRR QAAATPALLR MPATFAKGLY YIGWLRAHGV AIETGVTLER VLGERHVTGL
AWRAAGSDAP PRRIDCDALG LGFGLRSETQ LADLAGCRFR FDPLNHAWLP ERDAAGRTSV
RGLYVAGDGA GIAGADAAEA SGRRAALALL DDAGIATSSS SPLPAGKPDA AALDRTLARF
GAFRAGLEAA FAPPPELPAR CPDDTIVCRC EEIDAGTLRR CIRDGAATEL NRLKALTRAG
MGRCQGRMCG DATALVLAAE TGRPLADVGR LRAQPPVKPF PISAALAGDD VAAIPDEARD
E