| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5352 |
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| Symbol | |
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| ID | 4314241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2393099 |
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| End bp | 2394652 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638153193 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_777233 |
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| Protein GI | 115360095 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.121582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.862322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCCG CGCACGCCGG TGCTATGTTG GACATCCGGC CGCGCGACGC CGCGCGCCTT
CATCCGAATC CGATCATGAG TTTTCCCGAC GAAGACGATT TCCACCGGCT GCTCGACGCA
TTGACCACCT GCGTGCTGCT GCACGACGCG CAGACCCGCG CGATCGTGTG GGCGAACCGC
GCCGCGTGCA TCGCGCTCGG TTTTTCCGTC GAGGAGCTGC TGCCGCTGAA GGCGCAGGAC
ATGACGCGTC CCGAACCGAA ATACCGCCGC GAGATCGCCG TGAGCGCGTG GGATCGCGCG
CTCGTCGACG GCCCGCAGGT GTACGAGTGG TGCTACCGGT CCCGCACCGG CGTCGACATG
CTGTCGGAGG CGACCGCCAC CTACGTGCCG CTGCGCGGGC GCGACGTCGT GATGGTGCAG
TTCCGCGACA TCAGTGCGGA AGAGGCGGTG CGCCAGCAAC TGCGCCGCTA TGAGGCGCGG
CTGCGCGAGT TCATGCAGGA TCTCGACGAA GGGATCGCGG TCGTCACGCC ACAGGGCCGC
GTGCAGTTCA TCAGCGAGTC GGGCCGGCGC GTGCTCGGGC TCGCGCCGGA CGAAGCGCTC
GGCGAGGTGC TCGACTACTG CAGCGCGGCC GACCGCGACC GGCTCGTCGC GCAACTGCGC
GATGCGCCGT CGGCGTGCCC GTCCGAGCCG CAGCGCTACC GGATAGTGCG GCGCGACGGT
TCGACGTGCT GGCTGCGCAT CCTGTGCCGG CAGGTCGAGA TCGAAGGCGA TCTCGACGGG
CTGCTCGTGC AGTTTCGCGA CGTGAGCGAC GAAGTCGCGA TCGAGGACGC ACGGCGCGCG
GAAGCGCGCA TGCTCGAATA CGCGGGCCGC TACAACGCGA TGGGCGAGAT GGCGAGCGTG
ATCGCGCACG AGCTGAGCCA GCCGCTCGCG GCCGTGCGCA ATTTCATCGA GGGCGCGGTG
CGGCGGCTGA ATGCGCGCGG CGCCGTCGAC GATGCGATCT GGGGGCTGCG CAGCGCGGAC
CGGCAGGCCG AGCATGCGGC GCTGATCATC AAGAGCGTGC GCGAGTTCAT CGTGAAGCGC
GAGCCGGCTG TCGCGCTCGC CGATCTGCGC GAGATCCTCG CCGACGTCGC GTATTTCATC
GAGTTGCGGG CGAAGGAAGC GGGCGTGACG GTCGCGATCG TGCAGGCCGA TGCGCCGCTG
CCGATCCGCT GCGAGCGTGT GCTGATCGGG CAGGTGGTGC TCAACCTCGC GTTCAACGCG
ATCGAGGCGT TCGCCGGCTG CGAGCGCATG CCGCGCATGC TGATGCTCGG CACCGCGAAC
GTCGGCGGGC ACGCGGAGCT GCGCGCGATC GACAACGGCC CCGGTGTCGC CGAAGGGGCG
CACGACCGGC TGTTCGACGG TTTCTCGTCG TCGAAGGCTG GCGGCAACGG GATCGGGCTG
TCGCTGTGCA AGAGCATCGT CACGCGCCAC GGCGGCCGCA TCGTCGCGAG TCCGGCCGAA
GGCGGCGGGC TCGACTGCCG CGTGACGCTG CCGTTTGCCG ACGCGCAGGC GTAG
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| Protein sequence | MRAAHAGAML DIRPRDAARL HPNPIMSFPD EDDFHRLLDA LTTCVLLHDA QTRAIVWANR
AACIALGFSV EELLPLKAQD MTRPEPKYRR EIAVSAWDRA LVDGPQVYEW CYRSRTGVDM
LSEATATYVP LRGRDVVMVQ FRDISAEEAV RQQLRRYEAR LREFMQDLDE GIAVVTPQGR
VQFISESGRR VLGLAPDEAL GEVLDYCSAA DRDRLVAQLR DAPSACPSEP QRYRIVRRDG
STCWLRILCR QVEIEGDLDG LLVQFRDVSD EVAIEDARRA EARMLEYAGR YNAMGEMASV
IAHELSQPLA AVRNFIEGAV RRLNARGAVD DAIWGLRSAD RQAEHAALII KSVREFIVKR
EPAVALADLR EILADVAYFI ELRAKEAGVT VAIVQADAPL PIRCERVLIG QVVLNLAFNA
IEAFAGCERM PRMLMLGTAN VGGHAELRAI DNGPGVAEGA HDRLFDGFSS SKAGGNGIGL
SLCKSIVTRH GGRIVASPAE GGGLDCRVTL PFADAQA
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