Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5345 |
Symbol | |
ID | 4314234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 2387261 |
End bp | 2387806 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638153186 |
Product | 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit |
Protein accession | YP_777226 |
Protein GI | 115360088 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | [TIGR02296] 4-hydroxyphenylacetate 3-monooxygenase, reductase component |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0297424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGCCA CGACCGACAC CCCGCAACCG GCGCGCGCCG AACCGACCGA CGCGCAAAAG GCCTTCCGGC AAGCGATGGC CCACCTCGGC GCGGCCGTCA ACGTGATCAC CACCGCGGGG CCGCACGGCC GTTGCGGGAT CACTGCGAGC GCCGTCTGTT CCGTCACCGA TGCGCCGCCG ACGCTGCTCG TGTGCCTGAA CCGGTCGAGC GCGATGCACG CGATCTTCGA GCGCAATCGG CACGTGTGCA TCAACGTGCT GCCGGCCGAG CACGAACTGC TCGCGCGGCA TTTCGCGGGC CTCACCGAGC TGCCGATGGA GCGCCGCTTC GAGTTGCCGG TGTGGGATCG CGGCGAGCAG GACGTGCCCG TGCTGCGCGA CGCGCTCGCG AGCCTGCAGG GGACGATCGC CGAGATGAAG GAAGTCGGCT CGCATTCGGT GATGTTCATC GAGGCGACGT CGATCCGCGT GCGCCACGAC GGCGACAGCC TCATCTACTT CAGCCGCGCG TTTCATCGCG TGGCGCGCAC GGCGTGCGTG CGGTGA
|
Protein sequence | MSATTDTPQP ARAEPTDAQK AFRQAMAHLG AAVNVITTAG PHGRCGITAS AVCSVTDAPP TLLVCLNRSS AMHAIFERNR HVCINVLPAE HELLARHFAG LTELPMERRF ELPVWDRGEQ DVPVLRDALA SLQGTIAEMK EVGSHSVMFI EATSIRVRHD GDSLIYFSRA FHRVARTACV R
|
| |