Gene Bamb_5345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5345 
Symbol 
ID4314234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2387261 
End bp2387806 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content69% 
IMG OID638153186 
Product4-hydroxyphenylacetate 3-monooxygenase, reductase subunit 
Protein accessionYP_777226 
Protein GI115360088 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID[TIGR02296] 4-hydroxyphenylacetate 3-monooxygenase, reductase component 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0297424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA CGACCGACAC CCCGCAACCG GCGCGCGCCG AACCGACCGA CGCGCAAAAG 
GCCTTCCGGC AAGCGATGGC CCACCTCGGC GCGGCCGTCA ACGTGATCAC CACCGCGGGG
CCGCACGGCC GTTGCGGGAT CACTGCGAGC GCCGTCTGTT CCGTCACCGA TGCGCCGCCG
ACGCTGCTCG TGTGCCTGAA CCGGTCGAGC GCGATGCACG CGATCTTCGA GCGCAATCGG
CACGTGTGCA TCAACGTGCT GCCGGCCGAG CACGAACTGC TCGCGCGGCA TTTCGCGGGC
CTCACCGAGC TGCCGATGGA GCGCCGCTTC GAGTTGCCGG TGTGGGATCG CGGCGAGCAG
GACGTGCCCG TGCTGCGCGA CGCGCTCGCG AGCCTGCAGG GGACGATCGC CGAGATGAAG
GAAGTCGGCT CGCATTCGGT GATGTTCATC GAGGCGACGT CGATCCGCGT GCGCCACGAC
GGCGACAGCC TCATCTACTT CAGCCGCGCG TTTCATCGCG TGGCGCGCAC GGCGTGCGTG
CGGTGA
 
Protein sequence
MSATTDTPQP ARAEPTDAQK AFRQAMAHLG AAVNVITTAG PHGRCGITAS AVCSVTDAPP 
TLLVCLNRSS AMHAIFERNR HVCINVLPAE HELLARHFAG LTELPMERRF ELPVWDRGEQ
DVPVLRDALA SLQGTIAEMK EVGSHSVMFI EATSIRVRHD GDSLIYFSRA FHRVARTACV
R