Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5340 |
Symbol | |
ID | 4314229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2382509 |
End bp | 2383630 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638153181 |
Product | AraC family transcriptional regulator |
Protein accession | YP_777221 |
Protein GI | 115360083 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.795949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.566386 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTTC GGGACAATTG TTTTAGTATT TGGGCCAAAT CGGCGCTTCG AGGGTTTCTC CGCATGAGCT TCTGGGACTT CACCCGGAGT CCGGCCAGTG CCCGGCTGCT GGCCGATTTC GGCGACGAGC GCGGCGTGTC GCGCACGAAG CTGCTGTCCG GCACGGGCCT CGCGGACGCG CAGCTCGACG ATCCGAACGT CGAGGTGACG GCCGCGCAGG AACTGCGGCT GACCGGCAAT CTGCTGCGCG CGCTCGGGCG TGCGCCGGGC CTCGGGTTCG AGGTCGGGCA GCGCTATCAC TTCTCCGCAT ACGGCGTGTG GGGCTACGGA CTGATCGCGA GCGCGACCGC GCGCGACGCG CTGGCGCTCG CGATGCGCTT CCTGCCGCTC ACGTATGCGT TCACGGTGAT CACGTACCGC GAGGAAGCGC ACACGTGCGT GCTCAATTTC GGCGCGCCGG AGCTCGATGC CGACCTGAGC CGGTTCCTCG TCGAACGCGA CATGACGGCC GCCGTCGTGC TGCTGCAGGA AATCGGCGGC GACGATTTCG CGTTGTCGCG CTTCACGATG CAGGCCGCGA GCGCGGCGAG CGTAGCCACG TCCACACGCG CGCCCGCACC GCGCATCGCC GGTGTCGAAC CCGCGTTCGG CGCGCGTGCG AACAGCGTCG CGTTCGACCG CGGCTTTCTC GACCGGCCGC TGCCGCATGC GAACCCGCTG ACGGTTTCGA TGTGCGAGCA GATGTGCGTG CAGCTGGTCG AAGCGCGACG CGCGCGGGTC GGCACGTCGG AGATGGTGCG GCAATACCTG ACGGCGACGC CCGGCAACGT GCCGTTCTCG CTCGACGACA TCGCGCGGCT GATGAACACG AGCCCGCGCA CGCTGAAGCG CCGGCTGCAG GAGGAAGGCA CGACATTCCG CACGCTGCTC GCGCAGGCGC GCGGTGCGAT GGCCGAGACG CTGCTCGGCG ATGCGCACCT GTCGCTGACG GAAGTCGCCG AGCGGCTCGG CTTCAGCGAC CTGTCGAGTT TCTCGCAGGC GTTCAAGCGC TGGTATGGTG TGCCGCCGGG CACCTACCGC AGCGGCCTGC TGCGCGACGG CGCCCGCACC GACGCGGCGT AG
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Protein sequence | MLLRDNCFSI WAKSALRGFL RMSFWDFTRS PASARLLADF GDERGVSRTK LLSGTGLADA QLDDPNVEVT AAQELRLTGN LLRALGRAPG LGFEVGQRYH FSAYGVWGYG LIASATARDA LALAMRFLPL TYAFTVITYR EEAHTCVLNF GAPELDADLS RFLVERDMTA AVVLLQEIGG DDFALSRFTM QAASAASVAT STRAPAPRIA GVEPAFGARA NSVAFDRGFL DRPLPHANPL TVSMCEQMCV QLVEARRARV GTSEMVRQYL TATPGNVPFS LDDIARLMNT SPRTLKRRLQ EEGTTFRTLL AQARGAMAET LLGDAHLSLT EVAERLGFSD LSSFSQAFKR WYGVPPGTYR SGLLRDGART DAA
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