| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5337 |
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| Symbol | |
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| ID | 4314226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2379375 |
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| End bp | 2381177 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638153178 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_777218 |
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| Protein GI | 115360080 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.231686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAGAAG CTGCCTGTCA ACAGCACGCC TTTCCTTCCC GCCATCAACG GCGGGGTTTC
TCGGAGCAAA TTCTGATGAG CAAGACTTTC GACTACATCG TCGTCGGCGG CGGTTCGGGC
GGATGCGTCG TCGCAGGGCG ACTGACCGAG GACCCGGCCG TGACCGTCTG CGTGCTCGAG
GCCGGCGGCC GCGGCGACAC CGCGGTCGTC AACGTACCGA CCGGCTCGGT CGCCATGCTG
CCGACCCGCG TGAACAACTG GGCGTTCGAC ACCGTGCCGC AGCCCGGACT CGGCGGGCGC
ATCGGCTATC AGCCGCGCGG CAAGGCGCTC GGCGGTTCGT CCGCGATCAA CGCGATGGTC
TACATTCGCG GCCATCGCGT CGATTACGAC GGCTGGGCCG CACTCGGCAA CGAAGGCTGG
TCCTACGACG ACGTGCTGCC GTACTTCCGC CTGAGCGAGC ACAACGAGCG CTTCGACGAC
GCCTTTCACG GCCGCGACGG CCCGCTGTGG GTCAGCGACC TGCGCACCGG CAACCCGTTC
CATGCGCGCT ACCTGGAAGC GGCGCGCCAG GCCGGCCTGC CGCTCACCGA CGACTTCAAC
GGCGCGCAGC AGGAAGGTGT CGGCCTCTAT CAGGTCACGC AGAAGCACGG CGAGCGGTGG
AGCGCGGCGC GCGCGTATTT GCTGCCGCAC GTCGGCCGGC GCGACAACCT GACGGTCGAA
ACGCACGCGC AGGTGTTGCG CATCCTGTTC GACGGCATGC GTGCGACGGG TGTCGAGGTG
CGGCAACACG GCGAAGTGCG CACGCTGCGC GCCCGGCGCG AAGTCGTGCT CGCGGCCGGC
GCGCTGCAGA CGCCCCAGTT GCTGATGCTG TCGGGTGTCG GTCCGGCCGG CGAACTGCAG
CGGCTCGGCA TTCCGGTGCG CGCCGACCTG CCCGGCGTCG GCCGCAACCT GCAGGATCAT
CCGGACTTCA TCCTCGGCTA CCGCACACGC AGCGTCGACG CGATGGGCGT GTCCGTGCGC
GGCGGCCTGC GCATGCTGCG CGAGTTCGCG CGCTTTCGCC GCGAACGGCG CGGGATGCTG
ACGTCGAATT TCGCGGAAGG CGGCGGCTTC CTGAAAACGC GGGCCGGTCT CGATGCGCCC
GACATCCAGC TGCACTTCGT CGTCGCGCTC GTCGACGATC ACGCACGCCG GCTGCACGTC
GGCCACGGGC TGTCGTGCCA CGTGTGCCTC CTGCGACCGC GCAGCCGCGG CTCGGTCACG
CTGCATGGCA CCGATCCGCT CGCCGCGCCG CGCATCGACC CCGCGTTCTT CGACGACCCG
CGCGACCTCG ACGACATGGT CGCCGGCTTC CGGCTCACGC GCCGGCTGAT GGCGGCACCG
GCGCTTGCCG AATGGATCAC GCACGACCTG TTTACCGCGA ACGTCACGAC CGACGACGAA
ATCCGCGACG TGCTGCGCCG GCGCACCGAC ACCGTGTATC ACCCGGTCGG CACCTGCCGG
ATGGGGCGCG ACGCGCTCGC GGTCGTCGAT CCGCAATTGC GCGTGCACGG CCTGCAGGGG
CTGCGCATCG TCGATGCGTC GATCATGCCG ACGCTGATCG GCGGCAACAC CAACGCGCCG
ACGATCATGA TCGCCGAGAA GGCCGTCGAC CTGATCCGCG GCGCGCGGCG CGTGCCGGCA
TGCTCATCGG CCGACACGGC GCGCGAACCG GCCGCCGCGC CGGTGCACCG CAATCCCGCT
TATGCATCGT GCGCGTCGCA CGAGGCGATC CAGCCCGAGG AGATTCGCCA TGTCGTCGCC
TGA
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| Protein sequence | MEEAACQQHA FPSRHQRRGF SEQILMSKTF DYIVVGGGSG GCVVAGRLTE DPAVTVCVLE
AGGRGDTAVV NVPTGSVAML PTRVNNWAFD TVPQPGLGGR IGYQPRGKAL GGSSAINAMV
YIRGHRVDYD GWAALGNEGW SYDDVLPYFR LSEHNERFDD AFHGRDGPLW VSDLRTGNPF
HARYLEAARQ AGLPLTDDFN GAQQEGVGLY QVTQKHGERW SAARAYLLPH VGRRDNLTVE
THAQVLRILF DGMRATGVEV RQHGEVRTLR ARREVVLAAG ALQTPQLLML SGVGPAGELQ
RLGIPVRADL PGVGRNLQDH PDFILGYRTR SVDAMGVSVR GGLRMLREFA RFRRERRGML
TSNFAEGGGF LKTRAGLDAP DIQLHFVVAL VDDHARRLHV GHGLSCHVCL LRPRSRGSVT
LHGTDPLAAP RIDPAFFDDP RDLDDMVAGF RLTRRLMAAP ALAEWITHDL FTANVTTDDE
IRDVLRRRTD TVYHPVGTCR MGRDALAVVD PQLRVHGLQG LRIVDASIMP TLIGGNTNAP
TIMIAEKAVD LIRGARRVPA CSSADTAREP AAAPVHRNPA YASCASHEAI QPEEIRHVVA
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