| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5327 |
|---|
| Symbol | |
|---|
| ID | 4314216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 2368706 |
|---|
| End bp | 2370016 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638153168 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_777208 |
|---|
| Protein GI | 115360070 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCA CCGAAACCCT GGACCCCGCG TCCGCCGACG AGCAGCGCGT CATGTCGAAG
ATCGCGCGGC GCCTGCTGCC CATCCTCGTC GTGATGTTCC TGATCGCGTT CATCGACCGG
CAGAACGTCG GCTTCGCGAA GCTGCAGATG GTGCACAGCC TCGGGATGAC GGAAGCCGCG
TTCGGGCTCG CGTCGTCGCT GTTCTTCATC GGCTACCTGC TGTTCGAGGT GCCGAGCACG
CTCGCGCTGC ATCGCTACGG CGCCCGCGTG TGGCTCGCGC GGATCATGCT GACGTGGGGC
CTCATCACCG TGCTGATGGG CTTCACGACG TCGATGCCGG CGTTCTGCTC GCTGCGCTTC
CTGCTCGGCA TCGCCGAGGC CGGCTTCTAT CCGGGCGTGA TCTACTACCT GACGCTGTGG
TTTCCGCAGA GCTACCGCGC GAAGGTGCTC GGCATCTTCA CGCTCGGCAG CGCGCTCGCG
AACATGCTTG GGTCGCTCGT CGGCGGCGTG CTGCTGAGCC TGAACGGCGT GTGGGGCCTC
GCGGGCTGGC AGTGGGTGTT CGTGGCGACG GGCATCCCGG CCGTGATCGT CGCAATCGTG
GTGTTCCGCG TGTTGCCGGC CTCGTTCCGC GAGGCGTCGT TCCTCGACGA ACGCGAGAAG
CAGATCGTCG CGGCCGCGCT CGAGCGCGAG AAGCCGGCGC AGGCCGAGCA CGGCCAGCCG
TGGAAGGCGC TGCTCGATCC GCGCGTGATG CTGTTCGCGG CGACTTACAT GCTGATGTCG
ACGTCGCTGT ACGGCGTCAC GTACTGGTTG CCGACGCTCG TGAAATCGTT CGGCGTGTCG
AGCAGCATGA ACGGCTTCCT GAGCATGCTG CCGTGGGCGC TCGCGGTGGT GCTGCTGGTG
TGGCTGCCGT CGAAGCTGCG CCGCGCGAAG AGCATCCTGC GCACGATCGC GATCGTCGCG
GCGCTCGGCG CGCTCGGCTT TCTGCTGAGC CTCGTGCTGC CGTCGACGCC GCTGCGCTTC
GTCGCGCTCG TGCTCGGCGG CGCGTGCATT CCGCTGCTGT ATCCGTGTTT CTGGTCGATG
CCGCCGCGCT ACTTCACCGG CGCGCGCGCG GCGGCGAGTG TCGCGGCGAT CAACTCGATC
GGCAACCTCG GCGGCTTCTT CAGCCAGAAC CTGATGCCGT TCGCGGGCAA GGTGACGGGC
ACCGCATTCG GGCCGATGAT CGTGCCGATT GTGTGTCTCG CGCTGCTCGG AATCGGCGCG
CTGGTCGCGT GGACGCGCTC GGAGCGGGGG ATGGTGGCGG TGCGGGCGTG A
|
|---|
| Protein sequence | MNATETLDPA SADEQRVMSK IARRLLPILV VMFLIAFIDR QNVGFAKLQM VHSLGMTEAA
FGLASSLFFI GYLLFEVPST LALHRYGARV WLARIMLTWG LITVLMGFTT SMPAFCSLRF
LLGIAEAGFY PGVIYYLTLW FPQSYRAKVL GIFTLGSALA NMLGSLVGGV LLSLNGVWGL
AGWQWVFVAT GIPAVIVAIV VFRVLPASFR EASFLDEREK QIVAAALERE KPAQAEHGQP
WKALLDPRVM LFAATYMLMS TSLYGVTYWL PTLVKSFGVS SSMNGFLSML PWALAVVLLV
WLPSKLRRAK SILRTIAIVA ALGALGFLLS LVLPSTPLRF VALVLGGACI PLLYPCFWSM
PPRYFTGARA AASVAAINSI GNLGGFFSQN LMPFAGKVTG TAFGPMIVPI VCLALLGIGA
LVAWTRSERG MVAVRA
|
|---|
| |