Gene Bamb_5320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5320 
Symbol 
ID4314209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2362646 
End bp2363410 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content68% 
IMG OID638153161 
ProductABC transporter related 
Protein accessionYP_777201 
Protein GI115360063 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC TTTCTTCGGA ACCCGATACG ACCATGACCG ACGCGCTGCT GAAACTCGAA 
CACCTCGACA CGTTCTACGG GCCGGTGCAG GTGCACTTCG ACGTGAACTT CGAGGTCGGC
CGCGGGCAGA TCGTCAGCCT GCTCGGCGGC AACGCAAGCG GCAAGTCGAC GACGATGAAG
CTGATCCTCG GGCTGATGCG CCCACGCCGC GGCGTCGTGC GTTTCGACGG CGACGACGTG
ACCGCGCTCG CGACGCCGCA GCGCGTGCGG CGCGGGATTG CGGCCGTGCC GGAGGCGCGG
CGGCTGTTCG GCGACATGAG CGTGCGCGAG AACCTGCTGA TGGGCGCGTA CACGCGCGGC
GATCGTGCTG CGGTGGCCGA CGACTACGAG CGTGTGCTCG ACCTGTTTCC GCGTGTGCGC
GAACGGCTGA CGCAGCGCGC GGGCACGCTG TCGGGCGGCG AGCAGCAGAT GCTTGCGATG
GCGCGTGCGC TGATGGCGCG GCCGAAGCTG ATCTGCATGG ACGAGCCGAC GATGGGGCTG
TCGCCGCTCT ACGTCGACAA GGTGCTGGAA CTGATCGACG CGATTAACAA GCAGGGCGTG
ACGGTGTTCA TGGTCGAGCA GAACGCGAGC CTCGCGCTGG AGATCGCGCA CTATGGGTAC
GTGCTGCAGA CGGGGCGCGT CGTGCTCGAA GGGCCCGCGA AAACGCTGCT CGACGATGAG
CGCGTGCGCG ATGCGTATCT CGGTGGGGAG GCGGTGGCGG CGTAG
 
Protein sequence
MSALSSEPDT TMTDALLKLE HLDTFYGPVQ VHFDVNFEVG RGQIVSLLGG NASGKSTTMK 
LILGLMRPRR GVVRFDGDDV TALATPQRVR RGIAAVPEAR RLFGDMSVRE NLLMGAYTRG
DRAAVADDYE RVLDLFPRVR ERLTQRAGTL SGGEQQMLAM ARALMARPKL ICMDEPTMGL
SPLYVDKVLE LIDAINKQGV TVFMVEQNAS LALEIAHYGY VLQTGRVVLE GPAKTLLDDE
RVRDAYLGGE AVAA