| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5316 |
|---|
| Symbol | |
|---|
| ID | 4314205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 2357366 |
|---|
| End bp | 2358379 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638153157 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_777197 |
|---|
| Protein GI | 115360059 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTGC ATCAACTCGA AGCCTTTTCC GCAGTCATGT CGGCCGGCAG CGTAACCGGC
GCGGGCGAAC AGCTCGGCCG CTCGCAGCCG GCCGTCACGC GGCAGATCCA GGAACTCGAA
GCCGATCTCG GCTACGCGCT GTTCGACCGG CACGGCCCGC GCGTCGCGCC GACGCGGCGC
GCCTTCCTGC TTTACGAGGA AGTCGAACGC TCGCTAGTCG GCCTGCGTGC GATCGAGGCA
CGCGCACGGG CGCTCGGCGA TGAAACCGCC GAACCCGTCC GCATCGCGGC GACACCTTCG
CTCGCGGCCA CGCTCGTACC GGCCGCGCTC GCCGCGCTGC CTGACCACGC GCACGCGCCG
CACTACCAGT TGCGCAGCGA ATCGGCCGAA CATGTCGTCC ACGAGGTGCT GGCCGGCACG
GCCGATGTCG GCGTCGTCAC GCTGCCGATG GCGCACGCCG GGCTCGACGT GCACTGGATC
GCGCAGACGC CGTGCGTCGC CGTGCTGCCC GCCGGCGACC CGCTCGCGGC GCAGCCACGC
ATCGCGCTGC GCGATCTCGC GCAACGCCGC ATCGTGACGG TCGCGAACCG GCACCGGCTG
CGCCAGCGGA TCGATGCGGC ATTCGCGGCC GCGCGGGTCG ACGCGCGCGT GTTCATCGAA
ACCAATGCAT CGCTGAATGC GGTCATGGCC GCGCGCGCGG GCATCGGGAT CGGCATCGTC
GATCCGGCCA CGGGTATCGC GCTGCCGGTG GACGGCGTCG TCGCGCGAGC GCTCGACGTC
GACATCCCGT TCGCGTTCGG CGTTGCGACA CCGGCCGGCA AGACGCGCAC GGCGGCCGTC
GATGCGCTGC TCGACGCGCT GCGCCGCACG ACGCGCGCGC TGCTCGACGA CGTGATCTTT
CATGAAGCGG CCGCGCACGA CGCGCTGTTG CGTGGCGATC GGCTGCGCGG CGGCCGCACG
CCGCCCGCGC CTCGCCCGAC CCGCCCCCGC CGTTCGCGCA AGGAGGCCGC ATGA
|
|---|
| Protein sequence | MELHQLEAFS AVMSAGSVTG AGEQLGRSQP AVTRQIQELE ADLGYALFDR HGPRVAPTRR
AFLLYEEVER SLVGLRAIEA RARALGDETA EPVRIAATPS LAATLVPAAL AALPDHAHAP
HYQLRSESAE HVVHEVLAGT ADVGVVTLPM AHAGLDVHWI AQTPCVAVLP AGDPLAAQPR
IALRDLAQRR IVTVANRHRL RQRIDAAFAA ARVDARVFIE TNASLNAVMA ARAGIGIGIV
DPATGIALPV DGVVARALDV DIPFAFGVAT PAGKTRTAAV DALLDALRRT TRALLDDVIF
HEAAAHDALL RGDRLRGGRT PPAPRPTRPR RSRKEAA
|
|---|
| |