Gene Bamb_5309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5309 
Symbol 
ID4314198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2348998 
End bp2351754 
Gene Length2757 bp 
Protein Length918 aa 
Translation table11 
GC content73% 
IMG OID638153150 
Productmolecular chaperone-like protein 
Protein accessionYP_777190 
Protein GI115360052 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCT ATACCGTCGG CATCGACCTC GGCACGAGCA ACACGGTCGT CGCATACGTC 
GAGGCCGGCT CCGACGCGAT CCGCGTGTTC GACGTCGACC AGCTGGTCGG CCCCGGCGCG
GTGGCCGCGC AGCCGCTGCT GCCGTCGGTG CGCTATCACC CGGCGGCGGG CGAGCTGCCG
CCGGACGCGC TGCGCCTGCC GTGGGCGGCC GCTCCGAAGG CCGGCGCGGC CGCCGCCGAC
GCGCCGCCGG CCGTGATCGG CCGTTATGCG CGCACGCTCG GCGCCCAGGT GCCGGGCCGG
CTCGTCACCA GCGCGAAGAG CTGGCTGTCG CACGCATCGG TCGACCGACT CGCGGCGATC
CTGCCGTGGG GCGCGGCCGA CGGTGTCGAC AAGGTGTCGC CGGTCGACGC GAGCGCGAGC
TATCTCGCGC ACGTGCGTGC CGCGTGGGAT GCCCGCTTTC CCGATGCGCC GCTCGCGAAG
CAGGACATCA TCCTGACGGT GCCGGCCTCG TTCGACGACG GCGCACGCGC GTTGACGGTC
GAGGCCGCGA GGCGCGCGAA ACTGCCGGCG CTGCGCTTGC TCGAAGAACC GCAGGCCGCG
TTCTACGACT GGTTGTACGG CCAGCGCGCG ACGTTGCGCG ACACGTTCGC CGCGCCGCGC
CGCGTGCTGA TCTGCGATGT CGGCGGCGGC ACGACCGATC TCACGCTCGT CGATGTCGCG
CCCGGCGACG ACGGCGAACC GACCTTCACG CGCGTCGGCG TCGGCAATCA CCTGATGCTC
GGCGGCGACA ACATGGACCT CGCGCTCGCG CGGCTGGTCG AGACGCGGCT GACCGAGCCC
GGCACGCGGC TGTCCGCCGC GAGCCTGTCG CAGCTCGTCG AACGCTGCCG CGCCGCGAAG
GAGCGGCTGC TCGGCGACGA CGCGCCGGCG TCCGTCACCG TGACGCTGCT CGGCGCGGGC
AGCAAGCTCG TCGGCGGCGC GCGCTCGGCC GAGCTGACGC GGCAGGAAGT CGAGCAGGTC
GTCGTCGACG GTTTCTTTCC GCAGGTCGAG GCGGGCGAGC TGCCGCGTCG TGCGCGGGCC
GCGATCGTCG AATTCGGCTT GCCGTATGCG AGCGACCCGG GCGTCACGCG CCACGTCGCC
GCGTTCCTGA ACCGTCATGC GGAACGCCCG CTGCCCGACA CGCTGCTGCT CAACGGTGGC
GTGTTCCGCG CGGGTGCACT CGCCGGCCGC CTCGCGCAGA CGCTCGGCGC ATGGCGCGGC
GCACCGCTCG ACGTGCTGCA CAACGCGCAT CCGGATGTGG CCGTCGCGCG CGGCGCGGTG
GCGTACGGCC TGGCGCGCGC CGGGCATGCG CCGCGCATCG GCGGCGGCTC CGCGCGCAGC
TATTTCCTCG TGCTCGACGA CGGTGAGGGT GAGAGCGACG CCGCGCCGCG CGGCGTCTGC
CTGCTGCCGC GCGGTGCCGA GGAAGGCCGC GAGATCCGGC TCGAGGAGCG CACGTTCGCG
CTGCAGCTCG GGCAGCCGGT ACGTTTCCAC CTCGTATCGA CGGTGGCCGA CACCGCGTAC
CGGCCCGGCG ATCTCGTCGA GCTGGACGGC GGCGATTTCG TGCGGCTGCC GCCGATCGCG
ACGGTCGTCG ACCGGCAGGC CGGCGGCGAC GCCCGCGAAA CGCCGGTGAA ACTCACCGCG
TCGCTGACCG AGGTCGGCAC GCTCGAGATG CACTGCATCG CGACCGACGA TGCATCGCGG
CGCTGGCGGC TCGAATTCCA GTTGCGCGGC GATGCGCCCG CGCAGGGCGA CGGCGCCGCG
CCGGCGCGCC ATCCGCGTGT CGACCACGCG ATCGAGCTGA TCGACCGCTC GTTCGGTAGC
AAGGCCGCGG GCGTCACGCC GAAGGACACG CGACGGTTGC GCGCGCAACT TGAACAGGTG
CTCGGCCCGC GCGACGAGTG GGACGTCGCG CTCGCGCGCG AACTGTTCGA CGCGTTGCTC
GCACGGGCGC GTCGTCGGCG GCGCTCGGCC GATCACGAGC GCGCATGGCT GAACCTGGCC
GGCTATTGCC TGCGCCCCGG CTTCGGCCAT CCGCTCGATG CATGGCGCAT CGAGCAGCTG
TGGCCGCTGT TCGACGACGG GATTCAGTAC GTGAACGACG CGCAGGTGTG GTCGGAGTGG
TGGACGCTGT GGCGGCGCGT GGCCGGCGGC CTCGACGACG ATGCGCAGAC CCAGGTGCGC
GACGCGATCG CATTCCTCGA ACCGTCCGAC GACAAGCGCC GCAAGCTGCC ATTCGACCCG
GCCAAGGTCG GCCCGACCGA CATGACGCGC TTGTCCGCGT CGCTCGAGCG ATTGCCGGTC
GAGCGCAAGG TGGAACTGGC CGAGCGACTG ATCGTGCAAT TGCAGAAGCC GGCCGAGCGC
ACGCTGTGCG CGTGGGCGCT CGGGCGGATC GGTGCGCGCC GGCCGTTCTA CGGCAGCGCG
CACAGTGTCG TGCCGGCCGG GATCGCGAAC CGCTGGCTCG ACGCGCTGTT CGCGCTGGAC
TGGAAGCAGG TGGAACCGGC GGCCTTCGCG GCCGCGCAAA TCGCGCGGAT GACGGGCGAC
CGCGAACGCG ATCTGCCGGA CGACACGCGC GAAGCGGTGA TCAAGCGGCT GTCGGCCGCG
AATGCGTCGG CGGCGTGGAT CGACATGGTG CGCGAGGCGA TCGCGTTCGA CGAAGCCGAC
ACGGCGCGCG TGTTCGGCGA AACGCTGCCG GCCGGGTTGA AGCTGCTGGC CAGTTGA
 
Protein sequence
MKRYTVGIDL GTSNTVVAYV EAGSDAIRVF DVDQLVGPGA VAAQPLLPSV RYHPAAGELP 
PDALRLPWAA APKAGAAAAD APPAVIGRYA RTLGAQVPGR LVTSAKSWLS HASVDRLAAI
LPWGAADGVD KVSPVDASAS YLAHVRAAWD ARFPDAPLAK QDIILTVPAS FDDGARALTV
EAARRAKLPA LRLLEEPQAA FYDWLYGQRA TLRDTFAAPR RVLICDVGGG TTDLTLVDVA
PGDDGEPTFT RVGVGNHLML GGDNMDLALA RLVETRLTEP GTRLSAASLS QLVERCRAAK
ERLLGDDAPA SVTVTLLGAG SKLVGGARSA ELTRQEVEQV VVDGFFPQVE AGELPRRARA
AIVEFGLPYA SDPGVTRHVA AFLNRHAERP LPDTLLLNGG VFRAGALAGR LAQTLGAWRG
APLDVLHNAH PDVAVARGAV AYGLARAGHA PRIGGGSARS YFLVLDDGEG ESDAAPRGVC
LLPRGAEEGR EIRLEERTFA LQLGQPVRFH LVSTVADTAY RPGDLVELDG GDFVRLPPIA
TVVDRQAGGD ARETPVKLTA SLTEVGTLEM HCIATDDASR RWRLEFQLRG DAPAQGDGAA
PARHPRVDHA IELIDRSFGS KAAGVTPKDT RRLRAQLEQV LGPRDEWDVA LARELFDALL
ARARRRRRSA DHERAWLNLA GYCLRPGFGH PLDAWRIEQL WPLFDDGIQY VNDAQVWSEW
WTLWRRVAGG LDDDAQTQVR DAIAFLEPSD DKRRKLPFDP AKVGPTDMTR LSASLERLPV
ERKVELAERL IVQLQKPAER TLCAWALGRI GARRPFYGSA HSVVPAGIAN RWLDALFALD
WKQVEPAAFA AAQIARMTGD RERDLPDDTR EAVIKRLSAA NASAAWIDMV REAIAFDEAD
TARVFGETLP AGLKLLAS