Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5302 |
Symbol | |
ID | 4314191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 2341431 |
End bp | 2342402 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638153143 |
Product | ornithine cyclodeaminase |
Protein accession | YP_777183 |
Protein GI | 115360045 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.599287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACAG ACGCTCAACT CCTTCTTCTC GACCGCGACG TGGTCGAACC GGCCCTTCAA GCCGAACAAG TGACGGCGGC GGTCCGCGAG GCCTTCGTGC TGCATAGCCG ACGCGCCGGA CGCGTGTTCC CGGTCGTCCG CGAGAAGCTG CATACCGGCG GGGTATTCGG AATCAAGTCG GGCGACGTCG CGAGCCAGGA TCTGCTCGGT TTCAAGGCGG CCGGGTTCTG GCCCGGCAAT CGGGGCCGCG GTGGCGAACC GCATCAGGCG ACGATCGCGC TGTTCGATCC GGCCACCGGC CGCCCGCTCT GCATCATGGA CGGCAACGCG ATCACCACGG CCCGGACCGG TGCGGCAGGC GGCCTCGGGC TGCAGGCGCT CGCCCGCCGC GACAGCACGC GCATCTGCGT GTTCGGCACC GGCGTGCAGG CGCGCGTCCA GCTCGACTAT GCGATCAGGC TGCTGCCGCA ACGGTGCTCG GTGCAGTACG TGACAGTCAG CGGCGAAGTC GATCCGGAGT TCGAATCGGC ATTTCGCGAA CGCTGCGACA TCCGCGTCGC ACGAGACCGC AACGATGCGG TGGCCGACAG CGACGTGGTC ATCACGGCGA CACCGGGCGG CGGCCCGCTG TTCGATGCGG ATGCGGTTCA GCCAGGCACG CATCTGACGT GCGTGGGCGC GGATACCGCC GGCAAGCGCG AACTTCCCGA ACGCGTATTG GAGCGTGCGC GGATTTTCGT GGACGATCAC GAGCAGGCGC GCAGCATCGG CGAGTGTCAG TGGGCGCCGG ATTTGCCGCG CACTGAAATC GGCGACGTGC TCTCCGGGGC TGTGTCGGTC GATCGCGCGG CGAGCGAGAT CACCGTGTTC GACATGACGG GGCTCGCGCT GCAGGACCTG ACCGTTGCGC GTTTCCTGTA TCGGCACGCG GTCGAGCGCG GCGCGGGACG CGCCATCCCG TGGCCGTGGT GA
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Protein sequence | MPTDAQLLLL DRDVVEPALQ AEQVTAAVRE AFVLHSRRAG RVFPVVREKL HTGGVFGIKS GDVASQDLLG FKAAGFWPGN RGRGGEPHQA TIALFDPATG RPLCIMDGNA ITTARTGAAG GLGLQALARR DSTRICVFGT GVQARVQLDY AIRLLPQRCS VQYVTVSGEV DPEFESAFRE RCDIRVARDR NDAVADSDVV ITATPGGGPL FDADAVQPGT HLTCVGADTA GKRELPERVL ERARIFVDDH EQARSIGECQ WAPDLPRTEI GDVLSGAVSV DRAASEITVF DMTGLALQDL TVARFLYRHA VERGAGRAIP WPW
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