| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5301 |
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| Symbol | |
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| ID | 4314190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2340679 |
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| End bp | 2341434 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638153142 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_777182 |
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| Protein GI | 115360044 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.196602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGGCG ACTGCGTGGT ATCTTCCGTC GCCATGCACC TGACCAACGT TTCCGCCATC
TCGTTCGATC TCGACGACAC GCTGTGGCCG TTCGGACCGT CCGTCGAACG GGCCGAAGCG
TCGCTGCATG CGTGGCTGCT CGCGCACGCG CCCGAAACCG CGCGCGTGCT GCCCACGTCG
CAGGCGCTGA ACCAGTTGCG CGACGAATAC GAACGCTTGC GGCCGGATCT GGTCGGCGAC
TATCGTGCGT TGCGCATCGG CTCGATCCGG CTTGCGCTGG AACGCGCGAA CGAAGACGTC
ACGCTGACCG ACCGCGCATA CGACGTGTTT TATGCCGCGC GGAACCAGGT CGAGTTCTTC
GACGATGCAT TGCCGGCGCT CGCGTGGCTG AGCGCGCGCT TTCCGCTGGT CGCGGTGACG
AACGGCAATG CGGACCTTCG GCTGACCGGC GGCGGCGAGT TCTTCCGCGA AACGCTCAGC
GCGCGTGCGT TCGGCTTCGC GAAACCCGAG CCGGAGATCT TTCATGCGGC CGCCGCGACG
CTTGGCGTGC CTGCGGGGGA ACTGCTTCAT GTCGGGGATG ATTACCACCT CGATGTCGTC
GGCGCGTTGA ATGCGGGGCT TCAGGCGGCG TGGGTGGTGC GCGACGAAGG GGCGGAAACA
GCGCACGCCG CGCATGGTGC CCCGCCCCCT CATCTGACCA TTCGCGACTT GTCGATGCTG
TGTCACGCAC TCGGCGCCCC CGTCGGGCTG GCCTGA
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| Protein sequence | MNGDCVVSSV AMHLTNVSAI SFDLDDTLWP FGPSVERAEA SLHAWLLAHA PETARVLPTS
QALNQLRDEY ERLRPDLVGD YRALRIGSIR LALERANEDV TLTDRAYDVF YAARNQVEFF
DDALPALAWL SARFPLVAVT NGNADLRLTG GGEFFRETLS ARAFGFAKPE PEIFHAAAAT
LGVPAGELLH VGDDYHLDVV GALNAGLQAA WVVRDEGAET AHAAHGAPPP HLTIRDLSML
CHALGAPVGL A
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