Gene Bamb_5297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5297 
Symbol 
ID4314186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2338396 
End bp2338989 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content67% 
IMG OID638153138 
ProductTetR family transcriptional regulator 
Protein accessionYP_777178 
Protein GI115360040 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.755351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGG AAACACAGAC GAAGGGGAGC GCGCCCGATA CGCGCGAGCG CATTCTGCAA 
ACCGCCAGCG CGCTGTTCTA TCGGGAAGGG ACGCGTGCGG TGGGCGTGGA TCTGATCGTC
GCGCAGGCGG GCGTCGCGAA GACGAGCCTG TATCGGCATT TCGCGACGAA GGACGACCTG
ATCGAGGCGT TTCTGCTGCG CGAGGATGCG GATTTCTGGG CGCACTGGGA CGCGGTGGCC
GCGCGCTACC GGCGCACGCC GCGCGAGGAA CTGGATGCGC AATTGCAGTG GATCGGCGAG
CGCATCGAGC GGCCCGGTTA TCGCGGCTGT CCGCAGATCA ACATCGCCGC GGAGTATGCG
GACGGCAATC ATCCGGCCCG CAAGGTCGCC GTCGCGCACA AGCAGGAATT GCGGCGCCGG
CTGACGGAAC TGGCGAGCGC GATCGGGATC GACGAACCGC AGACTTACGC GCTGCGGCTC
GCGACCGTCA TCGACGGTGC GCTCAGCAGC GGGCACGCAC TGCACGCGCA CGGCCCCGTG
CGCTTCCTGC AGGAATTCGC GCAACTGCTG ATGCCGACGA AGGGCACGAA GTGA
 
Protein sequence
MKQETQTKGS APDTRERILQ TASALFYREG TRAVGVDLIV AQAGVAKTSL YRHFATKDDL 
IEAFLLREDA DFWAHWDAVA ARYRRTPREE LDAQLQWIGE RIERPGYRGC PQINIAAEYA
DGNHPARKVA VAHKQELRRR LTELASAIGI DEPQTYALRL ATVIDGALSS GHALHAHGPV
RFLQEFAQLL MPTKGTK