Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5297 |
Symbol | |
ID | 4314186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2338396 |
End bp | 2338989 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638153138 |
Product | TetR family transcriptional regulator |
Protein accession | YP_777178 |
Protein GI | 115360040 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.755351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACAGG AAACACAGAC GAAGGGGAGC GCGCCCGATA CGCGCGAGCG CATTCTGCAA ACCGCCAGCG CGCTGTTCTA TCGGGAAGGG ACGCGTGCGG TGGGCGTGGA TCTGATCGTC GCGCAGGCGG GCGTCGCGAA GACGAGCCTG TATCGGCATT TCGCGACGAA GGACGACCTG ATCGAGGCGT TTCTGCTGCG CGAGGATGCG GATTTCTGGG CGCACTGGGA CGCGGTGGCC GCGCGCTACC GGCGCACGCC GCGCGAGGAA CTGGATGCGC AATTGCAGTG GATCGGCGAG CGCATCGAGC GGCCCGGTTA TCGCGGCTGT CCGCAGATCA ACATCGCCGC GGAGTATGCG GACGGCAATC ATCCGGCCCG CAAGGTCGCC GTCGCGCACA AGCAGGAATT GCGGCGCCGG CTGACGGAAC TGGCGAGCGC GATCGGGATC GACGAACCGC AGACTTACGC GCTGCGGCTC GCGACCGTCA TCGACGGTGC GCTCAGCAGC GGGCACGCAC TGCACGCGCA CGGCCCCGTG CGCTTCCTGC AGGAATTCGC GCAACTGCTG ATGCCGACGA AGGGCACGAA GTGA
|
Protein sequence | MKQETQTKGS APDTRERILQ TASALFYREG TRAVGVDLIV AQAGVAKTSL YRHFATKDDL IEAFLLREDA DFWAHWDAVA ARYRRTPREE LDAQLQWIGE RIERPGYRGC PQINIAAEYA DGNHPARKVA VAHKQELRRR LTELASAIGI DEPQTYALRL ATVIDGALSS GHALHAHGPV RFLQEFAQLL MPTKGTK
|
| |