Gene Bamb_5295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5295 
Symbol 
ID4314184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2336467 
End bp2337234 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content70% 
IMG OID638153136 
ProductPEP phosphonomutase 
Protein accessionYP_777176 
Protein GI115360038 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0426519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGCA ATAACAAGGA AAAAGCCGCG TATTTCCGTT CGCTTCATCG CGCGGGCGAG 
CCGCTCGCGC TGTTCAACGT GTGGGACGCC GGCAGCGCGC GCACGGTGGC CGACGCGGGT
GGGCTCGCGC TGGCGACGGG CAGCTGGTCG GTCGCGGTCG CCAACGGGTT CGCCGACGGC
GAGCAGATGC CGAAAGCGCA CGTGATGGAA GTGCTCGCGC GGATCGCGCA AGCGACCGAC
CTGCCCGTCA CCGTCGATCT GGAAAGCGGG TACGGCGAGC GGCTGGAGGA CGTGGCCGAC
ACGATCGCAC GCAGCATCGA GGCCGGCGCG ATCGGCTGCA ATCTGGAGGA CAGCTTTCCG
GCGACGGGCG AACTGCGCAC CGTCGACGAC GCGGCCGCGC GTCTTGCGGC GGCCCGGCAG
GCGGCCGATC GCGCGGACAT CGGCTACTTC CTCAACGCGC GCACCGACGT GTTCTTCACG
GCCGCGGCCG ACACGCACGA CGAACGGCTT CTGGACGACG TGCTGACCCG CGCACGCGCG
TACGCGGCGG CGGGCGCCGA CGGCCTGTTC GTGCCGGGCC TGCGCTCGCC GGCGCTGATT
CGCGCGCTGA CCGCCGCGTC GCCGCTGCCC GTGAACATCA TGCGCGTGGC CGAAACGCCG
ACGCTCGCCG AACTCGCGGA ATACGGCGTC GCGCGCATCA GTCACGGGCC CTACCCTTAC
CTGCAGGCGA TGAAGGCGCT TGCGGCAGTG GTGAAGCAAG GCGGCTAG
 
Protein sequence
MSRNNKEKAA YFRSLHRAGE PLALFNVWDA GSARTVADAG GLALATGSWS VAVANGFADG 
EQMPKAHVME VLARIAQATD LPVTVDLESG YGERLEDVAD TIARSIEAGA IGCNLEDSFP
ATGELRTVDD AAARLAAARQ AADRADIGYF LNARTDVFFT AAADTHDERL LDDVLTRARA
YAAAGADGLF VPGLRSPALI RALTAASPLP VNIMRVAETP TLAELAEYGV ARISHGPYPY
LQAMKALAAV VKQGG