| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5284 |
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| Symbol | |
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| ID | 4314173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2321988 |
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| End bp | 2325626 |
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| Gene Length | 3639 bp |
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| Protein Length | 1212 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638153125 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_777165 |
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| Protein GI | 115360027 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit
[COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.415558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACC GACACACTTT CCCCGTTTCC TCCGACGCCG CACGCTGGCA ATTCTGGATC
GACCGCGGCG GCACCTTCAC CGACATCGTC GCGCGCCGGC CCGACGGCTC GCTCGTCACG
CACAAGCTGC TGTCGGAGAA TCCCGAGCAG TATCGCGATG CGGCCGTGGC CGGCATCCGC
CACCTGCTCG GCCTGGCCGA CGGCGAGCCG ATCACGCCGG AACGCGTCGA CATGGTGAAG
ATGGGCACGA CGGTCGCGAC CAACGCGCTG CTCGAACGCA AGGGCGAACG CACCGCGCTC
GCGACGACGC GCGGCTTTCG CGACGTGCTG CGCATCGCGT ACCAGAACCG GCCGCGCCTG
TTCGATCTCG ACATCGTGTT GCCCGATGCG CTGTACGAGA CCGTCGTCGA GGTCGACGAG
CGGGTCGGTG CGCACGGCGA CGTCGTCGTG CCGCTCGACG TGCAACGCGC GGAAGCCGAG
CTGCGCCGAG TGTTCGACTC GGGCGTGCAG GCGCTGGCCA TCGTGCTGAT CCACGGCTAT
CGCTACACCG CGCACGAGCG CGCGCTGGCC GAGCTTGCAC GCCGGATCGG CTTCACGCAG
GTGTCCGTGT CGCACGAGGT GTCGCCGCTG ATGAAGATGG TGTCGCGCGG CGACACGACC
GTGGTCGACG CGTACCTGTC GCCGATCCTG CGCCGCTACG TCGAGCAGGT CGCGCACGAG
ATGCCCGGCG TGAACCTGCA GTTCATGCAG AGCAGCGGCG GCCTGACGCG CGCCGATGCG
TTCCAGGGCA AGGACGCGAT CCTGTCCGGC CCGGCCGGCG GCATCGTCGG GATGGTGCGC
GCCGCGCGCG CGGCCGGCTT CGACCGCGTG ATCGGCTTCG ACATGGGCGG CACGTCGACC
GACGTGTCGC ACTACAACGG CGAATTCGAG CGCGTGTTCG AGACGCAGGT GGCCGGCGTG
CGGATGCGTG CGCCGATGAT GAGCATCCAC ACGGTCGCGG CCGGCGGCGG CTCGGTGCTC
GGCTTCGACG GCGCGCGGCT GCGCGTCGGG CCCGAATCGG CCGGCGCGAA TCCGGGGCCG
GCCGCGTACC GGCGCGGCGG CCCGCTGACC GTGACCGACT GCAACGTGAT GCTCGGCAAG
ATCCAGCCCG ATCATTTCCC GCGCGTGTTC GGCCCGCACG CGGACGAACC GCTCGAGCGC
GACGGCGTCG CCGCGAAATT CGCGGCGCTC GCCGACGAGA TCCACGCCGC GACCGGGCGG
CGCGAGACGC CCGAGGCGCT GGCCGAAGGC TTCCTCGAGA TCGCGATCGG CAGCATGGCG
AACGCGATCA AGAAGATTTC GGTGCAGCGC GGCCACGACG TGTCGCGCTA CGTGCTGACG
ACCTTCGGCG GCGCGGGCGG CCAGCACGCA TGCGGCGTGG CCGACGCGCT CGGGATGACG
CAGGTGTTCG CGCATCCGCT CGCCGGCGTG CTGTCCGCGT ACGGGATGGG CCTCGCCGAC
CAGACCGCGA TGCGCGAGCG CGCGGTGGAG GCGGTGCTGT CCGACGCGTC GCTGCCGGCG
CTGAACGCGA CGCTCGACCG GCTGACCGAC GACGCGGTCG GCGCGCTGCT CGAACAGGGC
GTGCCGCCGG AACGCATCGC GACCGAACGG CGCGTGCACC TGCGCTACCA GGGCACCGAT
TCCGCGCTCG ACGTGCCGGC CGGCAGCGTC GCCGCGATGC AGCAGGCGTT CGAAGCCGCG
TACCGGCAGC GTTACGCGTT CCTGATGCCC GGCACGCCGC TGGTCGCCGA ACTGGCCTCG
GTCGAGGCGA TCGGCCGCTC CGATGCGCCC GTCGAGATCG CGCCGCTCGC GCCGCGCGAC
GAGGGCGCGG CGCCGCAGGC CCACAGCGCC GTGCGGTTCC ATTCCGGCGG CCAATGGCAC
GACGCGGCGC TGTACGTGCG CGACACGCTG CTCGCCGGCG ACACGATCGA CGGCCCGGCG
ATCGTCGCGG AGCAGAACGG CACGACCGTC GTCGAACCCG GCTGGCGCGC GCGGATGACC
GCGCAGGGCA ACCTCGTGCT GACGCGCACG ACGCCGCTGC CGACGCGCCG CTCGCTCGGC
ACCGACGCCG ATCCGGTGCG GCTCGAGATC TTCAACAACC TGTTCATGTC GATCGCCGAG
CAGATGGGGC TGCGGCTGCA GAACACCGCG TACTCGGTGA ACATCAAGGA GCGGCTCGAC
TTCTCGTGCG CGGTCTTCGA CGGCGACGGC AACCTGATCG CGAATGCGCC GCACATGCCG
GTGCATCTGG GATCGATGGG CGAGAGCATT CGCACGGTGA TCGAGCGCAA CCGCGGCCGC
ATGCGCGACG GCGACGTGTT CATGCTGAAC GACCCGTATC ACGGCGGCAC GCACCTGCCC
GACGTCACCG TCATCACGCC GGTGTTCGCG GACGGCTCGG ACACGCCGCT GTTCTACGTC
GGTTCGCGCG GCCATCACGC GGACATCGGC GGCACGACGC CGGGCTCGAT GCCGCCCGAT
TCAAAGCACA TCGACGAAGA GGGTGTGCTG ATCGACAACT GGCAGCTCGT GTCGGCCGGC
GTGCTGCGCG ATGCGGACAC GCGCGCGCTG CTCGCGTCAG GCCGCTACCC GGCGCGCAAC
GTCGAGCAGA ACATGGCCGA CCTGCGCGCG CAGGTCGCCG CGAACCAGAA GGGCGTCGAC
GAGCTGCGGC GGATGGTCGC CCAGTTCGGC CGCGACGTCG TGCTCGCGTT CATGGGGCAC
GTGCAGGACA ACGCGGAAGA AGCGGTGCGG CGGGTGATCG GCGCGCTGCA GGACGGCGCG
TACCGCTATC CGCTCGACAA CGGCGCGGAG ATTCGCGTCG CGATCCGCGT CGACCGCGCG
GCGCGGCGTG CCGAGATCGA TTTCACCGGT ACGTCCGCGC AGCTCGACAA CAACTTCAAC
GCGCCGAAGG CCGTCTGCAT GGCCGCGGTG CTGTACGTGT TCCGTACGCT GGTCGGCGAC
GACATCCCGT TGAACGCCGG CTGCCTGAAG CCGCTCACCG TGATCGTGCC GGCCCGCTCG
ATGCTGAACC CCGAGTATCC GGCGGCGGTC GTGTCGGGCA ACGTCGAGAC GTCGTCGGCG
GTCACCAACG CGCTGTACGG CGCGCTCGGC TGCGTCGCGT CGAGCCAGGG GACGATGAAT
AACTTCACAT TCGGTAACGC TCAGTACCAG TACTACGAGA CGATCGCGGG CGGCAGCGGC
GCGGGTGACG GCTTCGCGGG CGTCGGCGCG GTGCAGACGC ACATGACGAA CTCGCGGCTG
ACCGACCCGG AAGTGCTCGA ATGGCGCTAC CCGGTGCGGG TCGACTCGCA CCGGCTGCGC
GCGGGCTCCG GCGGCGGCGG GCGCTGGCGC GGCGGCGACG GCGCGGTGCG GCGGATCCGC
TTCCTCGAGC CGATGACCGC GTCGATCCTG TCGAACAACC GGATCCATGC GCCGTTCGGT
GCGGCGGGCG GCGAGGCCGG CGCGCTCGGC CGCAACACGA TCGAGCGGGC CGACGGCACG
GTCGAGACGC TCGCGCATAT CGGCCGCGCG CAGATGGCGC AGGGCGACGT GTTCGTCGTC
GAAACGCCGG GCGGCGGCGG TTACGGCGCG GCGGGCTGA
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| Protein sequence | MTDRHTFPVS SDAARWQFWI DRGGTFTDIV ARRPDGSLVT HKLLSENPEQ YRDAAVAGIR
HLLGLADGEP ITPERVDMVK MGTTVATNAL LERKGERTAL ATTRGFRDVL RIAYQNRPRL
FDLDIVLPDA LYETVVEVDE RVGAHGDVVV PLDVQRAEAE LRRVFDSGVQ ALAIVLIHGY
RYTAHERALA ELARRIGFTQ VSVSHEVSPL MKMVSRGDTT VVDAYLSPIL RRYVEQVAHE
MPGVNLQFMQ SSGGLTRADA FQGKDAILSG PAGGIVGMVR AARAAGFDRV IGFDMGGTST
DVSHYNGEFE RVFETQVAGV RMRAPMMSIH TVAAGGGSVL GFDGARLRVG PESAGANPGP
AAYRRGGPLT VTDCNVMLGK IQPDHFPRVF GPHADEPLER DGVAAKFAAL ADEIHAATGR
RETPEALAEG FLEIAIGSMA NAIKKISVQR GHDVSRYVLT TFGGAGGQHA CGVADALGMT
QVFAHPLAGV LSAYGMGLAD QTAMRERAVE AVLSDASLPA LNATLDRLTD DAVGALLEQG
VPPERIATER RVHLRYQGTD SALDVPAGSV AAMQQAFEAA YRQRYAFLMP GTPLVAELAS
VEAIGRSDAP VEIAPLAPRD EGAAPQAHSA VRFHSGGQWH DAALYVRDTL LAGDTIDGPA
IVAEQNGTTV VEPGWRARMT AQGNLVLTRT TPLPTRRSLG TDADPVRLEI FNNLFMSIAE
QMGLRLQNTA YSVNIKERLD FSCAVFDGDG NLIANAPHMP VHLGSMGESI RTVIERNRGR
MRDGDVFMLN DPYHGGTHLP DVTVITPVFA DGSDTPLFYV GSRGHHADIG GTTPGSMPPD
SKHIDEEGVL IDNWQLVSAG VLRDADTRAL LASGRYPARN VEQNMADLRA QVAANQKGVD
ELRRMVAQFG RDVVLAFMGH VQDNAEEAVR RVIGALQDGA YRYPLDNGAE IRVAIRVDRA
ARRAEIDFTG TSAQLDNNFN APKAVCMAAV LYVFRTLVGD DIPLNAGCLK PLTVIVPARS
MLNPEYPAAV VSGNVETSSA VTNALYGALG CVASSQGTMN NFTFGNAQYQ YYETIAGGSG
AGDGFAGVGA VQTHMTNSRL TDPEVLEWRY PVRVDSHRLR AGSGGGGRWR GGDGAVRRIR
FLEPMTASIL SNNRIHAPFG AAGGEAGALG RNTIERADGT VETLAHIGRA QMAQGDVFVV
ETPGGGGYGA AG
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