Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5281 |
Symbol | |
ID | 4314170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 2318467 |
End bp | 2319399 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638153122 |
Product | LysR family transcriptional regulator |
Protein accession | YP_777162 |
Protein GI | 115360024 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.971291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACGC GTTTTCTCGA AACCTTCGTC ACGCTCGCGA AGCTGCGCAA CTTCCGCACG ACGGCCACCG CGCTGCACGC GACGCCGGCA GCGATCTCGC AGCGCCTGAA GGCGCTCGAG GATGAATTGC AGACCGTGCT CGTCGATCGC GACAGCCGCG AGTTCCGGCT CACGCCGAAC GGCGAGTATC TGCTCGGCTA TGCGAAGGCC GTCGTCGAGG CGACGCACGA GCTGCAGGCC GCCGCGGCCG GCGAAAGCGC GCTGCGCGGC AAGCTGCGGC TCGGCGTGAT CGAGACGGTC GTGCACAGCT GGCTGCCGCA CTATCTGCGC CGCCTCGCCG CCGACTATCC GCAACTGGAG GTCGACCTGA CCGTCGACGT CAGCGTCGTG CTGCAGCGCC GGCTGATGGC CGGCGAGCTC GATCTGATCA TTCGGGTGGA GGGCAGCGAC GAGGCGTCGG TCGTCTGCGA CGCGCTCGCG AATTATCCGG TGCGCTGGAT CGCGCGCGCG GGGCTGCTGC CGACCACGCG CACGGGCCTC GCGCGCCAGG TGCTGCGCCA GCCGATCCTC ACCTACGGGC GCGGTACCGC GCCGCACCGC GCGCTCGAGG ACATCGTGCG CACGCTCGCG CACGCGCATG GCGTGCCGCT GTCGGAGACG CGCATCACCG GCTCGCCGTC GATATCGGTG ATCGTGCAGC TCGTGCGCGA CGGCTTCGGC GTCGCCGCGA TTCCGGTGCT GTTCGTCGAT GCGCTGATCG CGAGCGGCGA GGTCGTCGAG CTGCCGCTGC AGCCGTCGCC GCCGTCGATC GTCGTGTCGA TGTCGCGCCG CGCCGACGCG CCGAAGTTCG TGCACGGCGC ATCGATCGCC GCGCGCGCCG CGTGTCACGA GTACTGCGAA AAGAGCAACC GGTTGCTGGT CGAGGCGCTT TGA
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Protein sequence | MNTRFLETFV TLAKLRNFRT TATALHATPA AISQRLKALE DELQTVLVDR DSREFRLTPN GEYLLGYAKA VVEATHELQA AAAGESALRG KLRLGVIETV VHSWLPHYLR RLAADYPQLE VDLTVDVSVV LQRRLMAGEL DLIIRVEGSD EASVVCDALA NYPVRWIARA GLLPTTRTGL ARQVLRQPIL TYGRGTAPHR ALEDIVRTLA HAHGVPLSET RITGSPSISV IVQLVRDGFG VAAIPVLFVD ALIASGEVVE LPLQPSPPSI VVSMSRRADA PKFVHGASIA ARAACHEYCE KSNRLLVEAL
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