| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5275 |
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| Symbol | |
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| ID | 4314164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2313145 |
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| End bp | 2313864 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638153116 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_777156 |
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| Protein GI | 115360018 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCCC GCACCTATCT CGTTACCGGC GCGTCGCGCG GCATCGGCTT CGCAACCAGC
ACGCTGCTCG CGCGGCGTGG CCATCGCGTC ATCGGTCTTG CGCGGCGTAC GCAAGGCATC
GACTTTCCCG GCGAACTGAT CGCGTGCGAT CTCGCCGATA TCGACCGGAC GGCCGCGACG
CTCGCCCGCA TCGGCGCATC GGAAGAGATC GACGGCATCG TGAACAACGC GGGCATCGCG
TTGCCACAGC CGCTCGGCAA GGTCGATTTC GCGTCGCTGC AGGCGGTGTT CGACCTCAAC
GTGCGCGCGG CGATCCAGGT CACGCAGCAT TTCGCCGATG CGATGAAGGC ACGCGGATAT
GGCCGCATCG TCAACGTATG CAGCCGCGCG ATCTTCGGCA GCCTCGATCG CACCGCGTAT
TCAGCCGCGA AAAGCGCGCT CGTCGGTTGC ACGCGTACGT GGTCGCTCGA ACTCGCCGAG
CACGGCGTGA CGGTCAACGC GGTCGCGCCG GGCCCGATCG AGACGGAACT GTTTCGCCAG
ACGCGGCCAG TCGGCAGCGA AGCCGAACGC AAGGTGCTGG CAACGATTCC CGCACGTCGT
CTCGGCACAC CGCACGATGT GGCCGCGGCG ATCGCGTTCC TGCTGTCCGA CGATGCAGCC
TTCGTCACGG GGCAGGTGCT CGCGGTGGAT GGCGGCGGCA GCCTCGGCGG ACGCAGCTGA
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| Protein sequence | MSSRTYLVTG ASRGIGFATS TLLARRGHRV IGLARRTQGI DFPGELIACD LADIDRTAAT
LARIGASEEI DGIVNNAGIA LPQPLGKVDF ASLQAVFDLN VRAAIQVTQH FADAMKARGY
GRIVNVCSRA IFGSLDRTAY SAAKSALVGC TRTWSLELAE HGVTVNAVAP GPIETELFRQ
TRPVGSEAER KVLATIPARR LGTPHDVAAA IAFLLSDDAA FVTGQVLAVD GGGSLGGRS
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