Gene Bamb_5264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5264 
Symbol 
ID4314153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2302789 
End bp2304066 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content67% 
IMG OID638153105 
Productepocide hydrolase domain-containing protein 
Protein accessionYP_777145 
Protein GI115360007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.642024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCA CACCGTTTTC CCCGATGCGT CGGCACCTGC TGGCCACGTC CGTGGCCGCG 
GGTGTATCCG CGATGCTGCC CACCGCGCTG CATGCGGCAA CCGGCGACAC CGGCATACGC
CCGTTCACCG CCCACATCCC CGACGACGCA CTGGTCGACC TGCGCCGCCG CATCACCGCG
ACACGCTGGC CGGGCCGCGA GACCGTCGCG GACGAATCGC AGGGCGTGCG GCTCGCGCGC
ATGCAGGCGC TGCTGCGCTA CTGGGGCACC GACTACGACT GGCGCAAGGG CGAGGCGCGC
CTGAACGGCT TCCCGATGTT CATCACGGAA ATCGACGGGC TCGACATTCA CTTCATCCAC
GTGCGGTCGC GGCACGCGAA TGCGATGCCG ATGATCATGA CGCACGGCTG GCCCGGTTCG
GTCTTCGAAC TCGTGAAGGC GATCGGCCCG CTGACCGACC CGACCGCGCA CGGTGCGAGC
GCGGACGATG CGTTCCACGT CGTCGTGCCG TCGCTGCCGG GCTTCGGTTT CTCGGGCCGC
CCGACGAAGA CGGGCTGGGG CTCGGACCAC ATCGCGCGTG CATGGGGCGA ACTGATGGCG
CGCCTCGGCT ATACGCGCTT CGTGTCGCAG GGCGGCGACT GCGGCTCGGT GATCTCGCAC
CGGATGGCGA TGCAGCGCGT GCAGGGCCTG GCCGGGATTC ACGTGAACAT GCCGGCGACG
GTGCCGCCGG ACATCGCGAC GCTGCTCCAG GTCGACGCGC CGGCGCCGGC ATCGCTGTCG
CCGAAGGAGA AGGCCGCGTA CGAGAAGCTC GCGACGTTCT ATCGCGACAA CTGCGGCTAC
TCGGCGATGA TGGTCACGCG TCCGCAGACG GTCGGCTACG CGCTCGCCGA TTCGCCGTCG
GGGCAGGCCG CATGGATGTA CGACAAGATC TCGCAGTGGA CGTACAGCGG CGGCGTACCC
GAACGTTCGA TTCCGCGTGA CGAGATTCTC GACGACATTT CGTTGTACTG GCTGACCAAC
ACGGCGACGT CCTCCGCGCA GATCTACTGG GAGGATCACT CGAACAACTT CAACGCGGTG
GACATCTCGC TGCCGGCCGC GATCACGGTG TTCCCCGGCG AGATCTATCA GGCGCCGCGC
AGCTGGGCCG AGCGCAGCTA TCACAACCTG ATCTACTTCA ACGAAGTCGA CAAGGGCGGC
CACTTCGCGG CATGGGAAGA GCCGGAGCTG TTCGCACGCG AAGTGCGTGC CGGGTTCCGG
CCGTTGCGTC GCGCGTAA
 
Protein sequence
MSSTPFSPMR RHLLATSVAA GVSAMLPTAL HAATGDTGIR PFTAHIPDDA LVDLRRRITA 
TRWPGRETVA DESQGVRLAR MQALLRYWGT DYDWRKGEAR LNGFPMFITE IDGLDIHFIH
VRSRHANAMP MIMTHGWPGS VFELVKAIGP LTDPTAHGAS ADDAFHVVVP SLPGFGFSGR
PTKTGWGSDH IARAWGELMA RLGYTRFVSQ GGDCGSVISH RMAMQRVQGL AGIHVNMPAT
VPPDIATLLQ VDAPAPASLS PKEKAAYEKL ATFYRDNCGY SAMMVTRPQT VGYALADSPS
GQAAWMYDKI SQWTYSGGVP ERSIPRDEIL DDISLYWLTN TATSSAQIYW EDHSNNFNAV
DISLPAAITV FPGEIYQAPR SWAERSYHNL IYFNEVDKGG HFAAWEEPEL FAREVRAGFR
PLRRA