| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5260 |
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| Symbol | |
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| ID | 4314149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2297687 |
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| End bp | 2299033 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638153101 |
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| Product | major facilitator transporter |
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| Protein accession | YP_777141 |
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| Protein GI | 115360003 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0336827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.340557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC AGGACGTCGA CACCAGAACG TTACGACGCG TGATCGCTGC AGCGTCGATT
GGCAATTTCG TCGAATGGTT CGATTTCGCC GCATACGGCT TTCTCGCCAC CATCCTGACG
CGCGAATTCT TCCCGAGCGG CGACCCGACG ATCGGACTCC TGAAGACATT CGCCGTCTTC
GCGGTGGCCT TCGCATTCCG CCCGCTCGGC GGCCTCATCT TCGGCGTCAT CGGCGACCGG
ATCGGCCGCA AGCGCACGCT TGCGCTGACG ATCCTGATGA TGGCCGGCTC GACGACGTTG
ATCGGCCTGC TGCCGACCTA CGCGAGCATC GGCTACTGGG CGCCGTTGCT GCTCACGATC
ATCCGCTGCG TACAGGGCTT TTCCGCCGGC GGCGAATACG CCGGCGCATG CGCGTACGTG
ATGGAACATG CGCCGCGCCG CCGCCGCGCA TTCTTCGGCA GCTTCGTGCC GGTATCGACC
TTCTCGTCGT TCGCTTGCGC GGCGGTGGTC GCCTATCTGC TCGAGTCGTC GCTGTCGTCG
CAGGCGATGA TCGAATGGGG CTGGCGCGTG CCGTTCCTGA TCGCGGCACC GGTCGGCCTC
ATCGGCGTCT ACCTGCGCGT CAACCTGAAT GAAACGCCCG CCTTCCAGGC GCTCGAAGGC
AAGCACGACA TTGCGCATGC CCCGCTGATG GAAACGTTGC ATTCGCAATC AAGGAATATC
CTCAAGCTCG GTGCGTTCGT GTCCGTGACG GCGCTGTCCT TCTACACGTT CACGACGTAT
TTCGCGACCT ACCTGCAAGT GGCCGGGCAC CTGTCGCGCG GCACGTCGCT CCTCGTCACG
GTGCTGGCTC TCCTGTTCGC CGCGGCATTG TGCCCGGTCG CCGGCCTCTT CTCCGACCTC
GTCGGCCGCC GCGCGACGAT CGCCACGACC GGCACCTTCA TCATCGTGTC GGTGTATCCA
GCCTTCTCGC TGGGCGGCTC GGGCGTGTTG TCGCACTCGC TGCTCGGCGT CGCGCTGCTC
GCGATCGGCG CGGTGTTCTC GGGCGTGGTG ACGGCGCCGC TGATGTCGGA AGTGTTCGCG
ACGAAAACCC GCTATACGGC GTCCGCGATC ACGTACAACC TCGCGTACAC GATCTTCGGC
GGCACCGCCC CGCTCGTCGC CACGTGGCTG ATTTCCGCGA CCGGCACCAA CTTGTCGCCC
GCGTACTACC TGATCGCCGT GTCGATCTTC GCGATGATCG GCGGGCTGTC GCTGCCGGAA
ACGTCGAAGA CGGCACTCGA GGAAGCCGGC CCGGCAACGG GGAGAGCCGC CCAGTCCGCG
AAGCGCGGCG TCGAACGCGC CGTTTGA
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| Protein sequence | MTTQDVDTRT LRRVIAAASI GNFVEWFDFA AYGFLATILT REFFPSGDPT IGLLKTFAVF
AVAFAFRPLG GLIFGVIGDR IGRKRTLALT ILMMAGSTTL IGLLPTYASI GYWAPLLLTI
IRCVQGFSAG GEYAGACAYV MEHAPRRRRA FFGSFVPVST FSSFACAAVV AYLLESSLSS
QAMIEWGWRV PFLIAAPVGL IGVYLRVNLN ETPAFQALEG KHDIAHAPLM ETLHSQSRNI
LKLGAFVSVT ALSFYTFTTY FATYLQVAGH LSRGTSLLVT VLALLFAAAL CPVAGLFSDL
VGRRATIATT GTFIIVSVYP AFSLGGSGVL SHSLLGVALL AIGAVFSGVV TAPLMSEVFA
TKTRYTASAI TYNLAYTIFG GTAPLVATWL ISATGTNLSP AYYLIAVSIF AMIGGLSLPE
TSKTALEEAG PATGRAAQSA KRGVERAV
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