Gene Bamb_5253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5253 
Symbol 
ID4314143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2292026 
End bp2292643 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content59% 
IMG OID638153095 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_777135 
Protein GI115359997 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.107453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.184483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTGT TGGTGCGCGG CTCACATGTT TTAATGGGGC CTCTATATTC TCGCCTGCCA 
GCCGTCATGC CGTTGTTCGG ACCCGTCACG CTGACTACCT CTCGCCTCAT TCTGCGGCCG
CTTCGTGATG AAGACGTGCA AGCGCTTTTC GCCATCTGGT CGGACGCGGA CGCGATGCGC
TATTTGCCGT TTCCGACGAT GACTTGCTTA GATCAGGCGA TGGATCGCGT CGCGCGTAAG
TTGAGGACCT CCGCTAACGG TCAGGAGTTC ATTTGGGCAC TCGAATTGCG GACAACCGGC
GAAGTGCTCG GGGACTGCGC TCTCTTTCAT GCGGATGAGC AATGCCGACG TGCGGAGATA
GGCTTTAGTC TGCAACGTAA TCATTGGGGA GGCGGCTATA TGACAGAGGC CACCTCCGCG
CTGATCGAGC ACGCATTCGG CACGCTGAAC TTACGCCGAA TTGAGGCGGA TATCGACCCG
CGCAACGTAG CCTCGGCGCG CCTTCTCGAA CGGCTCGGAT TTGTCCGGGA AGGATTGTTG
CGTGATCGGT GGGTGGTTGG CGATGAGGTG TCGGATAGCG CGCTGTACGG GCTGCTTAAG
AGCAATCGCC GGTCCTAG
 
Protein sequence
MRLLVRGSHV LMGPLYSRLP AVMPLFGPVT LTTSRLILRP LRDEDVQALF AIWSDADAMR 
YLPFPTMTCL DQAMDRVARK LRTSANGQEF IWALELRTTG EVLGDCALFH ADEQCRRAEI
GFSLQRNHWG GGYMTEATSA LIEHAFGTLN LRRIEADIDP RNVASARLLE RLGFVREGLL
RDRWVVGDEV SDSALYGLLK SNRRS