| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5249 |
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| Symbol | |
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| ID | 4314139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2287520 |
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| End bp | 2288671 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638153091 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_777131 |
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| Protein GI | 115359993 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.513235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTCC GCATTCGTTC GCTTTCCGGC ATTGCACTGA CCGCCGCGAT CCTCGCGTTC
CAGACGGGCG CGGCCCACGC GCAGGAGACG GTCGTGAAGG TCGGCGTGGC CGTGCCACTG
ACCGGCGGTG GCGCTGCCTA CGGCAAGGAC ATCGAGAACG GCGTGCGCAT GGCCGTCGAC
GAGGCGAACG CCGCGCATAC GACGATCGGC GGCAAGCCGG TGAAGTTCGT CGTCGCGTCG
CAGGACGACC AGAGCGATCC GCGCATCGGC GTACAGGCCG CGCAGCAGCT GACCGACGCG
CAAGTAGCCG TCGTGATCGG CCACTTCAAT TCGGGCACGA CGCTGCCCGC GTCGAAGATC
TACGCGAAGG CCGGCATTCC GATGATCACG CCGTCGGCGA CCAATCCCGA CATCACGCGC
GCCGGGCTCG GCACCGTGTA CCGCGTGATC GCCACCGACG CGCAGAACGC CGGCAACGCC
GGCGCCTATG CGGCGAGCGT GACCAAGGCG AAGCGCATCG CGATCATCGA CGATCGCACC
GCGTTCGGCC AGGGCGAAGC CGACGAGTTC GAGAAAGCCG CGAAGGCGAA CGGCGGCACG
ATCGTCGCGC GCGAATTCAC GAACGACAAG GCCGTCGACT TCAGCGCGCA GCTCACGAAG
ATCAAGAGCA CGAATGCCGA CCTGGTGTTC TTCGGCGGCC TCGACGCGCA GTCGGCGATG
CTCGTCAAGC GCATGCGCCA GCTCGGCATC CGCGCGCAGT TCCTGGCGGG CGGCGGCGTG
ATGAACGCGA ACTTCATCAA GCTCGCCGGC AACGCGGCCG AAGGCGCGTC CGTGTGGGAG
TACGGTCAGC CGCTGTCGCG TCTCGCGAAG GGCAAGCAGT TCGAAACGAA ATTCAAGCAG
AAGTACGGCG TCGACATGCT CGCGTATGCG CCGTTCGCGT ACGACGCGAC GTGGATCGCG
ATCAACGCGA TGCAGAAGGC GAACTCGACG AAGCCGACCG ATTTCAACGG TGCGCTGAAG
GGCACGCGCT ACGACGGCAT CACCGGCACG ATCGCGTTCA CGAACACGGG CGACCTGAAG
AACCCGAGTT CGACGCTGTA TGAAGTGAAG AACGCCGCGT GGCAGCCCGT CACCACGCAA
ACGGCGGACT GA
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| Protein sequence | MTFRIRSLSG IALTAAILAF QTGAAHAQET VVKVGVAVPL TGGGAAYGKD IENGVRMAVD
EANAAHTTIG GKPVKFVVAS QDDQSDPRIG VQAAQQLTDA QVAVVIGHFN SGTTLPASKI
YAKAGIPMIT PSATNPDITR AGLGTVYRVI ATDAQNAGNA GAYAASVTKA KRIAIIDDRT
AFGQGEADEF EKAAKANGGT IVAREFTNDK AVDFSAQLTK IKSTNADLVF FGGLDAQSAM
LVKRMRQLGI RAQFLAGGGV MNANFIKLAG NAAEGASVWE YGQPLSRLAK GKQFETKFKQ
KYGVDMLAYA PFAYDATWIA INAMQKANST KPTDFNGALK GTRYDGITGT IAFTNTGDLK
NPSSTLYEVK NAAWQPVTTQ TAD
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