| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5247 |
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| Symbol | |
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| ID | 4314137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2285207 |
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| End bp | 2286751 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638153089 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_777129 |
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| Protein GI | 115359991 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.603722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.35683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATC GAGTAAACGA ACAGACGCTC AAGTCGCATA CCGACCGGCG TCAGCTGTAC
CAGATCATCG CGGGGCTCAC CGAAGGCGTG ATCCTCATCG AACCCGACCA GCGCATCGTG
TGGGCAAACG AGGCCGCGCT CGCGATGCAC GGCGTCACCG AGCTCGACGC GCTCGGCGCG
GACGTGACCG AGTATCGCGA GCGCTTCCGG CTGCGCTACC GCAACAACAA TCCGGTGGGC
GACGGCCACT ATCCGATGGA TCGCGTGATC GCGGGCGAGG AGTTCAGCGA CGTGACGGTC
GAAGTCGAAT CGGCCGCCGA CGAGAACGTG AGCTGGGTCC ACCGGATCCG CAGCCTCGTG
CTGACGAACG CCGCCGGCGA GCCCGACTGT CTCGCGCTCG TGCTGCACGA CGCGACCGAA
TGGGCGAGCG CCGAGGAGCG CTTCGAGCTC ACGTTCAACG CGAACCCGGC GCCGGCCGTG
ATCTGCCGGC TCGACGACCT GCGCTACGTG AAGGTCAATC AAGGTTTCCT CGACATGACG
GGCCACGCAC GCGACGACGT GCTCGGCCGC TCCGTCTACG AAGTCGATGT GCTCGATCAG
GCCGAACATC GCGAACTCGC GATCGAGCGG CTCGGCGAGG GCGCGACGAT CCCGCAGATG
GAGGCCATGC TCAAGCGCGC GGACGGCGGC ACGAAGGCGG TCGTCGTCGC CGGGCAACCG
ATCGACATGA ACGGCGAGGC GTGCATGCTG TTCACGTTCA TGGATCTCGA GCCGCGCAAG
CAGGCCGAGC TCGCGCTGCG GCAGAGCGAG GAGTGCTTCG CGAAGGCGTT CCGGATGGCG
CCGGTCGCGA CCGCGATCGT CACCGCCGAC CGCTTCGAGC TGCTCGACGT GAACGACGCA
TTCGTCGCGA TGGCCGGCCA CGCGCGCGAC GATCTGCTCG GCAAGTCCGC CGACGAGATC
GGGCTGTGGG CCGAGCGCGG TGCGCGCCAG CAGATCGACA GCGCACTTGC GCGCGACGGC
AACGTGCGCA ACGCGGACGT GCAGATCCGC ACGGGCGACG GCGACGTGCG CGATTGCGTG
GTGTCGGCCG AACCGGTCGC GATTCACGGG CAGGATTGCC TGCTGATCGC GTTGCTCGAC
ATCAGCGATC GCAAGCGTAC CGAGATGGAG CTCGTCTACG CGATCGAGAC CGCGATGCAG
GATGCATCGT GGTTCAGCCG CACGCTGATC GAGAAACTGG CGAACGTGCG GCGCGAGAAT
GCGCCGGACG CAGGCGCGCA GCTGTCGGAT CTCACCGCGC GCGAGCGCGA CGTGTTCGAC
CTGCTGTGTC ACGGCCTCGC CGACAAGGAG ATCGCCGGCC GCCTCGGGCT CGCGCCGAAC
ACGGTCCGCA ATCATGTCGC GACGATCTAC GCGAAGCTCG ACGTGCATAG CCGCGGCGAG
GCGATCGTGT GGGCGCGCGA GCGCGGGATC GTCGGCGCGG CCGATGCGAA CGGCGCGCGC
GGCGACAAGG GCGCCGAGAA GGGCGGTGCG AACGTCAAGG GCTGA
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| Protein sequence | MDDRVNEQTL KSHTDRRQLY QIIAGLTEGV ILIEPDQRIV WANEAALAMH GVTELDALGA
DVTEYRERFR LRYRNNNPVG DGHYPMDRVI AGEEFSDVTV EVESAADENV SWVHRIRSLV
LTNAAGEPDC LALVLHDATE WASAEERFEL TFNANPAPAV ICRLDDLRYV KVNQGFLDMT
GHARDDVLGR SVYEVDVLDQ AEHRELAIER LGEGATIPQM EAMLKRADGG TKAVVVAGQP
IDMNGEACML FTFMDLEPRK QAELALRQSE ECFAKAFRMA PVATAIVTAD RFELLDVNDA
FVAMAGHARD DLLGKSADEI GLWAERGARQ QIDSALARDG NVRNADVQIR TGDGDVRDCV
VSAEPVAIHG QDCLLIALLD ISDRKRTEME LVYAIETAMQ DASWFSRTLI EKLANVRREN
APDAGAQLSD LTARERDVFD LLCHGLADKE IAGRLGLAPN TVRNHVATIY AKLDVHSRGE
AIVWARERGI VGAADANGAR GDKGAEKGGA NVKG
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