Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5229 |
Symbol | |
ID | 4314119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 2269952 |
End bp | 2270806 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638153071 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_777111 |
Protein GI | 115359973 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTC ATACCCGCAT CACCCGCAAG ACCGTCACCG CGATCCGCTC GACCAAAGGG ATCGGCAGCC TCGTGTCGCT GACCGCGTAT TCCGCGCCAA TGGCAAAACT CGTCCACGAC GTGGCCGACG TGATCATCGT CGGCGACTCC GTCGGCATGG TGCTGTACGG GATGCCCGAT ACGCTGCGCG TCACGCTCGA CATGATGATT GCACACGGCG CGGCCGTCGT GCGCGGCGCC GCGCAGGCGT GCGTTGTCGT CGACCTGCCG TTCTCCACGT TCCAGGAATC GCCCGCGCAG GCGTACCGCT CCGCCGCGCG GCTGCTCGCC GAAACCGGCG CGCAGGCCGT GAAGCTCGAA GGCGGCTGCG AGATGACCGA TACGATCCGC TTCCTGACCG AGCGCGGCAT TCCGGTGATG GCGCATGTCG GCCTCATGCC GCAGCAGGCC AACGCGGCGG GCGGCTTTCG CGCGCAGGGG ATGGACCCGC TTTCGGCCGC GCAGGTGTTC GACGCCGCGT GTGCTGCCGA ACGGGCCGGC GCGTTCAGCG TCGTGATCGA AGGCACTGCC GAGGCGCTCG CGCGCCACCT GACCGGAACG CTGACGATCC CGACGATCGG CATCGGCGCA TCGCCCGCGT GCGACGGGCA AGTGCTCGTG ACCGAGGACA TGATCGGCGC GTTCGATGCG TACACGCCGC GCTTCGTGAA GCGTTACGCG GATGCGAATG CGGTGATGCG CGACGCGATC CGCCAGTACG CGCATGACGT GCGGCACCGC GTGTTTCCGG AGCCCGCGCA TTGCTTCGGA TACGGGAAGC CGCTGCAACT GGCCGATGCG GGCGCAACGG TGTGA
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Protein sequence | MSAHTRITRK TVTAIRSTKG IGSLVSLTAY SAPMAKLVHD VADVIIVGDS VGMVLYGMPD TLRVTLDMMI AHGAAVVRGA AQACVVVDLP FSTFQESPAQ AYRSAARLLA ETGAQAVKLE GGCEMTDTIR FLTERGIPVM AHVGLMPQQA NAAGGFRAQG MDPLSAAQVF DAACAAERAG AFSVVIEGTA EALARHLTGT LTIPTIGIGA SPACDGQVLV TEDMIGAFDA YTPRFVKRYA DANAVMRDAI RQYAHDVRHR VFPEPAHCFG YGKPLQLADA GATV
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