Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5221 |
Symbol | |
ID | 4314111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2257910 |
End bp | 2258803 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638153063 |
Product | AraC family transcriptional regulator |
Protein accession | YP_777103 |
Protein GI | 115359965 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.343965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.936054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGTTCCG GGCCGCCGTC TTGGAAAAAT CCGCTGTGGC GGTGCATCAT TACGGCAATC CCCCACCCGT TCGTCACCAT GGCCGACTTG CGTAACGTGA CCGACCCGCC CAAGGGCGTC GTCGGCCCGA AAGCCTTCAA CCAGCGCTTC CGCCTGAATC GCTACTACCC GTGTGCCGAA CTGGCCGGGG TGCTCGATCA CCACTGGGTC GTCGAATGGG ATCTGCGCGG CCAGCCGCCG TACGTGCAGC GCACGCTGCC GTATCCGTGC GTGAATCTGG TGTTCGACCG GCGACACACG GGGATCTTCG GTGTGGTGTC GGGCGCGTTC GAGACGACGC TGGCCGGGGC CGGGAAGGTG ATCGGCATGC GGTTTCGGCC CGGCGCGTTT CGCGCGTTCC TCGGCAAACC CGTGCATCTA CTGACCGACA AGGTGGTGCC GGTGTCGACG CTGCTCGATT GCGGCGATGC GGAAGCCGAA AACGCCGTGC TCGGCGGCGA GGACGATGCC GCGATGGTGG CGGCGGCCGA GGCGCTGCTG TTGCGCGTGC TGCCGCCGCC GGATCCGCAG GTCGAGCGCA TTCATGCCAT TTTGCAGATG CTGCAGCAGG ACCTCGCGCT GACGCAGGTG CGTGATCTGA CCGAGCGTGC GGGGTTGAGC GAGCGCACGC TGCAGCAGCT CTTTTCCAGC CATGTGGGCG TGACGCCGAA GTGGGTGATC TGCCGATACC GGTTGCACGA GGCCGCCGAC AAGCTCTCCG GCGGCGAGCC GGTTGATCTC GCGGAACTGG CGCATGCGCT CGGGTATTTC GATCAGGCGC ATTTCACGCG CGATTTCCGC AAGCTGGTGG GGAAGGCGCC GGCGGAGTAT CGGCGGGAAG ATCGGCAGCA GTGA
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Protein sequence | MGSGPPSWKN PLWRCIITAI PHPFVTMADL RNVTDPPKGV VGPKAFNQRF RLNRYYPCAE LAGVLDHHWV VEWDLRGQPP YVQRTLPYPC VNLVFDRRHT GIFGVVSGAF ETTLAGAGKV IGMRFRPGAF RAFLGKPVHL LTDKVVPVST LLDCGDAEAE NAVLGGEDDA AMVAAAEALL LRVLPPPDPQ VERIHAILQM LQQDLALTQV RDLTERAGLS ERTLQQLFSS HVGVTPKWVI CRYRLHEAAD KLSGGEPVDL AELAHALGYF DQAHFTRDFR KLVGKAPAEY RREDRQQ
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