Gene Bamb_5221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5221 
Symbol 
ID4314111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2257910 
End bp2258803 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content66% 
IMG OID638153063 
ProductAraC family transcriptional regulator 
Protein accessionYP_777103 
Protein GI115359965 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.343965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.936054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTTCCG GGCCGCCGTC TTGGAAAAAT CCGCTGTGGC GGTGCATCAT TACGGCAATC 
CCCCACCCGT TCGTCACCAT GGCCGACTTG CGTAACGTGA CCGACCCGCC CAAGGGCGTC
GTCGGCCCGA AAGCCTTCAA CCAGCGCTTC CGCCTGAATC GCTACTACCC GTGTGCCGAA
CTGGCCGGGG TGCTCGATCA CCACTGGGTC GTCGAATGGG ATCTGCGCGG CCAGCCGCCG
TACGTGCAGC GCACGCTGCC GTATCCGTGC GTGAATCTGG TGTTCGACCG GCGACACACG
GGGATCTTCG GTGTGGTGTC GGGCGCGTTC GAGACGACGC TGGCCGGGGC CGGGAAGGTG
ATCGGCATGC GGTTTCGGCC CGGCGCGTTT CGCGCGTTCC TCGGCAAACC CGTGCATCTA
CTGACCGACA AGGTGGTGCC GGTGTCGACG CTGCTCGATT GCGGCGATGC GGAAGCCGAA
AACGCCGTGC TCGGCGGCGA GGACGATGCC GCGATGGTGG CGGCGGCCGA GGCGCTGCTG
TTGCGCGTGC TGCCGCCGCC GGATCCGCAG GTCGAGCGCA TTCATGCCAT TTTGCAGATG
CTGCAGCAGG ACCTCGCGCT GACGCAGGTG CGTGATCTGA CCGAGCGTGC GGGGTTGAGC
GAGCGCACGC TGCAGCAGCT CTTTTCCAGC CATGTGGGCG TGACGCCGAA GTGGGTGATC
TGCCGATACC GGTTGCACGA GGCCGCCGAC AAGCTCTCCG GCGGCGAGCC GGTTGATCTC
GCGGAACTGG CGCATGCGCT CGGGTATTTC GATCAGGCGC ATTTCACGCG CGATTTCCGC
AAGCTGGTGG GGAAGGCGCC GGCGGAGTAT CGGCGGGAAG ATCGGCAGCA GTGA
 
Protein sequence
MGSGPPSWKN PLWRCIITAI PHPFVTMADL RNVTDPPKGV VGPKAFNQRF RLNRYYPCAE 
LAGVLDHHWV VEWDLRGQPP YVQRTLPYPC VNLVFDRRHT GIFGVVSGAF ETTLAGAGKV
IGMRFRPGAF RAFLGKPVHL LTDKVVPVST LLDCGDAEAE NAVLGGEDDA AMVAAAEALL
LRVLPPPDPQ VERIHAILQM LQQDLALTQV RDLTERAGLS ERTLQQLFSS HVGVTPKWVI
CRYRLHEAAD KLSGGEPVDL AELAHALGYF DQAHFTRDFR KLVGKAPAEY RREDRQQ