Gene Bamb_5215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5215 
Symbol 
ID4314105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2253188 
End bp2254255 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content72% 
IMG OID638153057 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_777097 
Protein GI115359959 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGCT TCGTCTATCA GGGAACGCCG TCGCGCGTCG TGTTCGAATG GGGCGCGCTC 
GAGCGGCTGC CCGACGAGTT GTCCGCGCTC GGCGCGCACC GCGCGCTGAT TCTGTCGACG
CCCGAGCAGC AGCCGCTCGC CGAACGGGTC GCCGGCGTGC TCGGCGAGCG GGCGGCCGGC
GTATGCGCGC AGGCCGTGAT GCACGTGCCG ATCGAGGTGG CCCGTGCCGC GCGCGAGAGG
GCGGCCGAGC TGGGCGCGGA CTGCTGCATC GCGATCGGCG GCGGCTCGAC GATCGGGCTC
GGCAAGGCGA TCGCGCTCGA ATCGTCGCTG CCGATCCTCG CCGTGCCGAC GACCTACGCG
GGTTCGGAGA TGACGCCGAT CTACGGGCTC ACGGAAGGCC GGCTGAAGCG CACCGGGCGC
GATGCGCGCG TGCTGCCGCG TACGGTGCTC TACGACCCGT CGCTGACGTT GTCGCTGCCG
CCGGGGATTT CGGCGGCGTC CGGCGTCAAC GCGATGGCGC ATGCGGTCGA AGCGCTCTAT
GCGGAAGATG CGAACCCGGT GATCAGCCTG ATGGCCGAGG AGTCGATTCG TGCGCTCGGC
GAGGCGCTGC CGGCGATCGT GCGCGCGCCC GACGACCGCG AGATGCGCAG CCGCGCGTTG
TACGGCGCAT GGCTTGCCGG CACGTGTCTC GGCGCGGTCG GCATGGCGCT GCACCACAAG
CTCTGTCACA CGCTCGGCGG CACTTTCAAC CTGCCGCACG CGCAGACCCA CGCCGCGATG
TTGCCGCACA CGGCCCACTA CAACCATGCC GCGGCGCCCG ACGCGCTGCG CCGGGTCGCG
CGGGCGCTGG GCGGCACCGA CGCGGCCGAC GCCGGTCCGC TGTTGTTCCG GTTGAATCGG
CAGCTCGGCC TGTCGACGGC GCTTGCCGAT ATCGGGATGC CGGAAGCGGG CCTCGACGAA
GCCGCCGACC TCGCATGCCG GAACTCCTAC GCGAATCCGC GGCCGATCGA ACGCGCGCCG
ATTCGCGAAT TGCTTCAGCG TGCGTGGCAA GGGCACGCGC CGCAGTGA
 
Protein sequence
MERFVYQGTP SRVVFEWGAL ERLPDELSAL GAHRALILST PEQQPLAERV AGVLGERAAG 
VCAQAVMHVP IEVARAARER AAELGADCCI AIGGGSTIGL GKAIALESSL PILAVPTTYA
GSEMTPIYGL TEGRLKRTGR DARVLPRTVL YDPSLTLSLP PGISAASGVN AMAHAVEALY
AEDANPVISL MAEESIRALG EALPAIVRAP DDREMRSRAL YGAWLAGTCL GAVGMALHHK
LCHTLGGTFN LPHAQTHAAM LPHTAHYNHA AAPDALRRVA RALGGTDAAD AGPLLFRLNR
QLGLSTALAD IGMPEAGLDE AADLACRNSY ANPRPIERAP IRELLQRAWQ GHAPQ