Gene Bamb_5214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5214 
Symbol 
ID4314104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2251714 
End bp2253180 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content68% 
IMG OID638153056 
Productbetaine-aldehyde dehydrogenase 
Protein accessionYP_777096 
Protein GI115359958 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCC AACTCTTCAT CGACGGCCGC TTCGTTGACG CCGTCGAGCG CGGCACGATC 
GACGTGCTCA ATCCGCACGA CGGCTCGCTG ATCACAAAGA TCGCCGCGGC CACCGCGGCG
GACGTGGACC TGGCCGTGGA AGCCGCCACC CGCGCGTTCC CGAAGTGGTC GGCCATGCCG
GCGGCCGAAC GCGGCCGGCT GCTGCTGCGT CTGGCCGACG CGATCGAAGC CAACGCGGAG
GAACTAGCGC AACTCGAATC GCTGGACACC GGCCACCCGA TCCGCGATTC GCGCGCGCTC
GACGTGCCGC GCACGGCGGG ATGCTTCCGC TACTTCGGCG GGATGGCCGA CAAGCTGCAG
GGCTCGGTGA TTCCGGTCGA AACCGGCTTC CTGAACTACG TGCAGCGCGC GCCGATCGGC
GTCGTCGGCC AGATCGTGCC GTGGAATTTC CCGCTGATGT TCACGAGCTG GAAGATGGGC
CCGGCGCTGG CCGCGGGCAA CACGGTGGTG CTCAAGCCGT CGGAGATCAC GCCGCTGTCG
ACGCTGCGTA TCGTCGAACT GATGGCCGAG GTCGGGTTCC CGGCCGGTGT CGTCAACATC
GTCCCCGGTT ACGGGCATAC GGCGGGCCAG CGGCTCGCCG AACATCCCGG TGTCGGGAAG
ATTGCGTTCA CCGGTTCGAC GGCGACGGGC CGCCGCATCG TCGACGCATC GCAGGGCAAC
CTGAAGCGCG TGCAGCTGGA GCTGGGCGGC AAGGGTGCGA ACATCGTGTT CGACGATGCG
AACCTCGACG CGGCCATCAA CGGCGCCGCG TGGGCGATCT TCCACAACCA GGGGCAAGCG
TGCATCGCGG GTTCGCGTCT CGTGCTGCAC GAACGCATCG CCGACGCATT CCTCGAGCGC
TTCGTGTCGC TGGCGTCGTC GATCCGTGTC GGCAATCCGC TGGATCCGGA CACCGAGATG
GGCCCGCTGA CGTCGAAGCA GCATCTCGAC CGCGTGCTGT CGTTCGTCGA CGTCGCGCGT
GAGCAGGGCG GCCGTGTGCT CACGGGCGGC AGCGTGCCGC AGGATGCGGC GCTCGCCAAC
GGCTACTACG TGCGCCCGAC GGTCATCGAA GCGAAGAGCG CGACCGACCG TGTCGCACAG
GAGGAAGTGT TCGGCCCGTT CGTCACCGTG CTGCGCTTCG GCAGCGACGA GGAAGCGCTG
TCGATCGCCA ACGCGACCGA ATACGGGCTC GGCAGCGGCC TGTGGACCAA CGATCTGTCC
CGCGCACACA GGATGGCGGC GCGGATCGAC GCGGGCATGT GCTGGATCAA CTGCTACAAG
CGCGTCAATC CGGGCAGCCC GTTCGGCGGC GTCGGCCAGT CGGGCTACGG CCGCGAGATG
GGTTTCGAGG CGATGCACGA CTACACGGAA GCGCGCTCGG TGTGGGTCAA CGTCGACGGC
AACGTGCCGC CGCATTTCAA ACGCTGA
 
Protein sequence
MQTQLFIDGR FVDAVERGTI DVLNPHDGSL ITKIAAATAA DVDLAVEAAT RAFPKWSAMP 
AAERGRLLLR LADAIEANAE ELAQLESLDT GHPIRDSRAL DVPRTAGCFR YFGGMADKLQ
GSVIPVETGF LNYVQRAPIG VVGQIVPWNF PLMFTSWKMG PALAAGNTVV LKPSEITPLS
TLRIVELMAE VGFPAGVVNI VPGYGHTAGQ RLAEHPGVGK IAFTGSTATG RRIVDASQGN
LKRVQLELGG KGANIVFDDA NLDAAINGAA WAIFHNQGQA CIAGSRLVLH ERIADAFLER
FVSLASSIRV GNPLDPDTEM GPLTSKQHLD RVLSFVDVAR EQGGRVLTGG SVPQDAALAN
GYYVRPTVIE AKSATDRVAQ EEVFGPFVTV LRFGSDEEAL SIANATEYGL GSGLWTNDLS
RAHRMAARID AGMCWINCYK RVNPGSPFGG VGQSGYGREM GFEAMHDYTE ARSVWVNVDG
NVPPHFKR