Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5200 |
Symbol | glyA |
ID | 4314091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2232705 |
End bp | 2233952 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638153043 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_777083 |
Protein GI | 115359945 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAATC GCACTACCAG CACCGTCGCC AACGTCGATC CCGAACTCTG GACTGCCATT CAGGACGAGA ACCGCCGCCA GGAAGACCAC ATCGAGCTGA TCGCGTCGGA AAACTACACG AGCCCGGCCG TGATGGCCGC CCAGGGCTCG CAGCTCACGA ACAAGTACGC GGAAGGTTAT CCGGGCAAGC GCTACTACGG CGGCTGTGAA TACGTCGATG TGGTCGAGCA GCTGGCGATC GACCGTGTGA AGCAGCTGTT CGGCGCGGAA GCCGCGAACG TGCAGCCGAA CTCGGGTTCG CAGGCGAACC AGGGCGTGTT CTTCGCGATG CTCAAGCCGG GCGACACGAT CATGGGCATG AGCCTCGCGC ACGGTGGTCA CCTGACGCAC GGCTCGCCGG TGAACATGTC GGGCAAGTGG TTCAACGTGG TGAGCTACGG TCTGAACGAG CAGGAAGACA TCGACTACGA CGCGGCCGAG CAGCTCGCGC AGGAACACAA GCCGAAGCTG ATCGTCGCGG GTGCATCGGC GTTCGCGCTG AAGATCGACT TCGAGCGTCT GGCGAAGATC GCGAAGTCGG TCGGTGCATA CCTGATGGTC GACATGGCGC ACTACGCGGG CCTGATCGCG GCGGGCGTGT ATCCGAACCC GGTGCCGCAC GCCGACTTCG TGACGACCAC GACGCACAAG AGCCTGCGCG GCCCGCGCGG TGGCGTGATC CTGATGAAGT CGGAATACGA GAAGCCGATC AACTCGGCGA TCTTCCCGGG CATCCAGGGT GGCCCGCTGA TGCACGTGAT CGCGGCGAAG GCCGTGGCGT TCAAGGAAGC GCTGTCGCCG GAATTCAAGG CGTACCAGGA AAAGGTGGTC GAGAACGCGC GCGTGCTGGC TGAAACGCTG GTCAAGCGCG GCCTGCGGAT CGTGTCGGGC CGCACCGAAA GCCACGTGAT GCTGGTGGAC CTGCGCGCGA AGAACATCAC GGGCAAGGCA GCGGAAGCAG CGCTCGGTGC CGCGCACATC ACGGTGAACA AGAACGCGAT CCCGAACGAT CCGGAGAAGC CGTTCGTGAC GAGCGGCATC CGTCTGGGTT CGCCGGCGAT GACGACGCGC GGCTTTGGCC CGGCGGAAGC GGAACTGGTC GGCAACCTGA TCGCCGACGT GCTCGAGAAT CCGGAAGATG CAGCGACGAT CGAGCGCGTG CGCGGGCTTG TCGCGGAGTT GACGCAGCGT TTCCCGGTCT ACAGCTGA
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Protein sequence | MFNRTTSTVA NVDPELWTAI QDENRRQEDH IELIASENYT SPAVMAAQGS QLTNKYAEGY PGKRYYGGCE YVDVVEQLAI DRVKQLFGAE AANVQPNSGS QANQGVFFAM LKPGDTIMGM SLAHGGHLTH GSPVNMSGKW FNVVSYGLNE QEDIDYDAAE QLAQEHKPKL IVAGASAFAL KIDFERLAKI AKSVGAYLMV DMAHYAGLIA AGVYPNPVPH ADFVTTTTHK SLRGPRGGVI LMKSEYEKPI NSAIFPGIQG GPLMHVIAAK AVAFKEALSP EFKAYQEKVV ENARVLAETL VKRGLRIVSG RTESHVMLVD LRAKNITGKA AEAALGAAHI TVNKNAIPND PEKPFVTSGI RLGSPAMTTR GFGPAEAELV GNLIADVLEN PEDAATIERV RGLVAELTQR FPVYS
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