Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5199 |
Symbol | |
ID | 4314090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2231604 |
End bp | 2232383 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638153042 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_777082 |
Protein GI | 115359944 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCCA AGATTGACGG TCGCCTTGCC GGCAAGGTCG CCATCGTGAG CGGCGGCGCG GGCGGATGCG GCGCCGCCGC GTCCGAGCTG TTCGCCGCGC AGGGCGCGAA GGTGGCGATC ATCGACCGCG ACGGCGACGC TGCCGACACG CTCGCGTCGC GGTTGCGCGA TGCCGGCCTG CAGGCGATCG GCCTGCAAGC CGACGTGTCG AAGCAGCCGG ACGTGCGGAA CGCGGTCGAT GCGGCCCACA AGCAGTACGG CAACGCGGAC ATCCTGTTCA ATCATGCGGG CACGCTGATC GTCAAACCGT TTCTCGACAT CGAGGAGTCG GAATGGGACT GGCTGATGGG CGTGAACGTG AAGAGCATGT TCCTGATGAC GAAGGCGGTG CTGCCGCAGA TGCTGGAAAA AGGGCGCGGC AGCATCGTGT GTACGTCGTC GATCTCGGCC GTCTTCGCGA CGCCCGGCGA GGTGCTGTAT GACGCGACCA AGGGCGCATG CCAGATGTTC GCGCGGGCGA TCGCCGTCGA ATACCGCGAC CGCGGCATTC GCTGCAACGC GCTGGCGCCT GGCTTCATCC GCACGCCGCA CGGGATGCGC GAGCTGAAGG ATCTGCAGGC GATGGGCGTG GACGCGACCG AGGCGGCCAT CGCGGTGCAG CAAGGCCGCC TGTGCGAGCC GTCGGAAGTG GCCGCGGCCG CGCTGTTCCT TGCGTCCGAC GAATCGAGCT TCGTCAACGG CACCCAGCTA TTCGTCGACA ACTGTTTTTC CGCCGTTTAG
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Protein sequence | MNAKIDGRLA GKVAIVSGGA GGCGAAASEL FAAQGAKVAI IDRDGDAADT LASRLRDAGL QAIGLQADVS KQPDVRNAVD AAHKQYGNAD ILFNHAGTLI VKPFLDIEES EWDWLMGVNV KSMFLMTKAV LPQMLEKGRG SIVCTSSISA VFATPGEVLY DATKGACQMF ARAIAVEYRD RGIRCNALAP GFIRTPHGMR ELKDLQAMGV DATEAAIAVQ QGRLCEPSEV AAAALFLASD ESSFVNGTQL FVDNCFSAV
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