| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5198 |
|---|
| Symbol | |
|---|
| ID | 4314089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 2230323 |
|---|
| End bp | 2231570 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638153041 |
|---|
| Product | FAD-linked oxidoreductase |
|---|
| Protein accession | YP_777081 |
|---|
| Protein GI | 115359943 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01679] FAD-linked oxidoreductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTTC CACGTGGCGG ATTCTGGCGG AACTGGGTCG GCAATCAGTC GTGCGTCGCC
GCGCACATGG CGGCGCCCAC CAGCGAGGCG GAGATTGCCG AGCTGGTGCA CGCCGCGACG
AGCCGGGGCA AGAACGTCCG CTGCGCGGGA TCGGGGCATT CGTTCACGCC CATCGTCGCG
ACCAGCGGCC TGCTGCTGTC GCTGAAGGAC TACCACGGCA TCGTCGCGGT CGACGAGCAG
CAGAAGCGCG TGACGGTGAA GGCCGGCACG CGGATCAACG CGGTCACGCA GCATCTGAAG
CAAATCGGCT TCTCGCTCGT CAACCAGGGC GACATCGATT CGCAGGCCAT TGCCGGTGCG
TTGGCGACGG GCACGCACGG CACCGGGACG ACGCTGAGCA ACCTGTCGTC GCAGGTGGTC
GGGATGCGCA TCGTTCGTCC CGACGGCTCG ATCATGGAAG TGAGCGACAA GCAGGACCGC
GACCTGCTGC ACGCGACGCA GGTGAATATC GGCATGTTCG GCGTGGTCTC CGAGCTGACG
CTGCAGGTGA CCGACGCGTT CTGGCTGCAC GACCGCGTGT GGCGCGAGGA CTTCGACGCG
CTGATGGAGC GTTACGACGA GCTCGCGGCG ACGCACCGGC ATTTCGGTTT CTTCTGGTGC
CCGACGTCCG AGAGCCGCCA CCTGTACTGC CTGCCCGACA CCACCGCGGT GTCGCATTCG
AAGAAAGACT ACGACGTGTG CGAAGTGAAG GTGATGGACA TCACTGCCGC GCGCACGTAC
CACGAAGGCG AGCACGAGAA GATCGCGTAC AGCTCGGAGG TCTACGCGAT CCACTACGTC
GCGAACTTCC ACGAACTCGA GTACGCGGTG CCTGCCGAAC ACGGCAAGGA AGCGCTGCGC
CGCGTGCGCG ACCTGATCCT CACGAAGCAT CGGGACTGCA TCTTCCCGGT CGAGTACCGC
TTCACGAAGG GCGATCCGGC ATGGATCAGC CCGTTCAATC ACCAGGACAG CGTGACCATC
TCGTGCTCGG GCGGCCCGAA CGGCGTCGAC TACTGGCCGT TCCTGAAGGA TGTCGACGAC
ATCCTGCGCG ACTACGGCTC GCGTCCGCAC TGGGGCAAGC TGCACTTCAC GAACCGCGAC
GACGTCGACC GTTGGTTCCC GAAGGCCGAG GCGTTCCGCG AACTGCGCCG CAGCGTGGAC
CCGGAAGGCC GTTTCCTCAA CGATCATCTT CGGACCCTGT TCAGCTGA
|
|---|
| Protein sequence | MELPRGGFWR NWVGNQSCVA AHMAAPTSEA EIAELVHAAT SRGKNVRCAG SGHSFTPIVA
TSGLLLSLKD YHGIVAVDEQ QKRVTVKAGT RINAVTQHLK QIGFSLVNQG DIDSQAIAGA
LATGTHGTGT TLSNLSSQVV GMRIVRPDGS IMEVSDKQDR DLLHATQVNI GMFGVVSELT
LQVTDAFWLH DRVWREDFDA LMERYDELAA THRHFGFFWC PTSESRHLYC LPDTTAVSHS
KKDYDVCEVK VMDITAARTY HEGEHEKIAY SSEVYAIHYV ANFHELEYAV PAEHGKEALR
RVRDLILTKH RDCIFPVEYR FTKGDPAWIS PFNHQDSVTI SCSGGPNGVD YWPFLKDVDD
ILRDYGSRPH WGKLHFTNRD DVDRWFPKAE AFRELRRSVD PEGRFLNDHL RTLFS
|
|---|
| |