| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5194 |
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| Symbol | |
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| ID | 4314085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2224012 |
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| End bp | 2225826 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638153037 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_777077 |
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| Protein GI | 115359939 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.337928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCGA CAATCCGCCT GTTTGCCCCG CTATTGCTGC TGCCCACGCT TGCCGCGCCG
GTTCTCGCGG CGACCGCCGC CCCCGTCAGC CCGAACTGCG GCGGTAGCAC GACGCCGATC
GCCGACATCC AGGGGCCGGG CGCGCCGTCG CCGCTCGCCG GCCAGAACGC GTCGATCGAA
GCGGTCGTCA CGGCCGATTT CGGCGGCACG TACGGCTTCG GCGGCTTCTT CGTCCAGCAG
GCCGACCCGC AGCGCCGCAA CCAGCCGGGC GTGTCCGAAG GTCTGTTCGT CTATGCGCCG
AAAGTGCGCG CGAAGGCCGG AGATCTCGTG CACGTGACGG GCAAGGTCGA GGAGAAATAC
GGGCAGACGC AGCTCACGCT GTCGGGCGCG ATCGCGGTGT GCGCGAACGG CCAGACGGTC
ACGCCGGCGA CGCTCACGCT GCCGGTCGAC AGCCCGAACG CGTTCGCCGC GTATGAAGGG
ATGCTGGTGC GCCTGCCGCA GACGCTCACC GTCACCGACA ACTACGAGCT CGGCCGTTAC
GGCAGCACGA TGCTGAGCAA CGGCCGGCTG CGCACGCCGA CGAGCGTGGT GTCGCCGTCG
CAGGCGCAGA CGCAGATCGA TGCGAACGCA CGCAATCGGT TGATTCTCGA TGACGGCTCG
AACAAGCAGA ACCCGGCGAG CGTGCCGTAT CCGGCGCCGG CACTGTCGGC CGCGAACACG
CTGCGCTCGG GCTACACGGT GCGCAACGTC GAAGGCGTGC TCGAGGTGCG CTACGGCGCC
TGGCGCGTGC AGGCGCTGCC GGGCGCGGCC GCGCCGACGT TCGACACGCG CGCGAACCCG
CGCACCAACG CACCGGCACG CGATCCGAAA TCGAACCTGC GCGTCGCGTC GTTCAACGTC
CTCAACTACT TCAACGGCAA CGGCATGGGC GGCGGCTTCG ACGATCCGAA CAACCGCGGC
GCGAAGAACT ATCAGGAATT CCAGCGTCAG GAAGCGAAGA TCGTCAGCGC GCTGAAGGCG
CTCGATGCCG ACGTGATCGG CCTGATGGAA ATCCAGAACA ACGGCTACGG CGAACTGAGC
GCGGTGCGGC AGCTCGCGGC GAAGCTCGGC AGCAACTGGC GCGTGGTCGA TCCGGGCACG
TCGCGCCTCG GCGGCGACGC GATCACGGTC GCGATGATCT ACGACAGCCG CACGGTCGAA
CCGGTCGGCC GCGCGTCGAC GCTCGCGATC GACGACAAGA ACCGCCAGCC GCTCGCACAG
TCGTTCCGCC GCGTCGGCGG CAACAAGCAG GCGCTGACGA TCGCGGTCAA CCACCTGAAG
TCGAAGAACT GCCCGGACGC GGCGAACGAC GACCTCGACC AGGGCGACGG TCAGGGCTGC
TGGAACCCGA CGCGCACGCG CGCGGCGGCG AAGCTGGCGG ACTGGCTCGC CGGCACGCCG
ACGGGCGTCG CGGGGCAGGG CACGCTGCTG ATCGGCGACT TCAACAGCTA CACGTATGAA
GACCCGATCC GCCTGCTCGA AGCGCGCGGC TACCGCAACC TCGTGTCGCG CTGGATCGGC
GCGAACGCGT ACAGCTACGT GTACAACGGC GAAGCCGGCT ACCTCGATCA CGCGCTCGCA
TCGCTGCCGC TCGCGTCGCA CGTGAAGGCC GTGCACGAAT GGCACATCAA CGCAGATGAG
CCGCTCGCGC TGCAGTACAC GCTCGCGTAC AAGTCGACCG AGCAGCAGAA GACGTACTAC
GCGCCGGATG CGTATCGCTC GTCGGATCAC GATCCGGTGC TGATCGATAT CGCGCTGCCG
GGCGGCGGGC GCTGA
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| Protein sequence | MRSTIRLFAP LLLLPTLAAP VLAATAAPVS PNCGGSTTPI ADIQGPGAPS PLAGQNASIE
AVVTADFGGT YGFGGFFVQQ ADPQRRNQPG VSEGLFVYAP KVRAKAGDLV HVTGKVEEKY
GQTQLTLSGA IAVCANGQTV TPATLTLPVD SPNAFAAYEG MLVRLPQTLT VTDNYELGRY
GSTMLSNGRL RTPTSVVSPS QAQTQIDANA RNRLILDDGS NKQNPASVPY PAPALSAANT
LRSGYTVRNV EGVLEVRYGA WRVQALPGAA APTFDTRANP RTNAPARDPK SNLRVASFNV
LNYFNGNGMG GGFDDPNNRG AKNYQEFQRQ EAKIVSALKA LDADVIGLME IQNNGYGELS
AVRQLAAKLG SNWRVVDPGT SRLGGDAITV AMIYDSRTVE PVGRASTLAI DDKNRQPLAQ
SFRRVGGNKQ ALTIAVNHLK SKNCPDAAND DLDQGDGQGC WNPTRTRAAA KLADWLAGTP
TGVAGQGTLL IGDFNSYTYE DPIRLLEARG YRNLVSRWIG ANAYSYVYNG EAGYLDHALA
SLPLASHVKA VHEWHINADE PLALQYTLAY KSTEQQKTYY APDAYRSSDH DPVLIDIALP
GGGR
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