| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5189 |
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| Symbol | |
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| ID | 4314080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2219168 |
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| End bp | 2220739 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638153032 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_777072 |
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| Protein GI | 115359934 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGAC TTGCAATGTC ACCGCGAATC GGCGCGACCG CGCTCGTGCT GGCCTTCCTC
GCCGGCTGTA CGACGTTCTC GAAGGACGGC GGCTTCGACG CCGTGTCGTC CGCCGCATCG
GCGCGCATCG GGAAAGACGC CGTGATCGTC AGGACCGACG CCGATCGCGA CGCCGTCGAC
GCGCGCACGA AGGAACTGCT CGCGAAACCG CTGTCGATGG ACGACGCGGT GCAGCTCGCG
CTGCTGAACA ACCGCGGCCT GCAGGCGTCG TACGCGGCGC TCGGGCTGTC GGAGGCCGAT
CTCGTGCAGG CCGGCCGGCT GCCGAACCCG CGCTTCTCGT TCAGCCGCAC GCGGGCCGGC
GACGGCGAGC TGAGCCTCGG GCGCACGTTC TCGGCCAACG TGTTCGCGCT GCTGACGCTG
CCGCTCGCGA CGAACATCGA ACGCCGCCGC TTCGAGCAGA CCAAGCTCGA GACTGCCGAT
GCGATGCTGA AGGTCGCGGC CGACGCGCGC CGCGCGTATG TCGAGGCCGT CGCCGCCGAA
CAGGCCGCCA ACTATGCGCG GCAGGTGCGC GACGCCGCGA GCGCCGCCGC CGAACTCGCG
CTGCGCATGC GCCAGGCCGG CAACTTCAGC CGGCTCGACT ACGCACGCGA ACAGGCGTTC
CATGCGGACG CGGTCGCCCA GCAGGCGAAG GCGCAGCAGC AGGCCGTGGC CGAGCGCGAG
AAGCTCACGC GGGCGATGGG GCTGTGGGGC GAGCGCACGC GCTACGCGCT GCCCGAGCGT
CTGCCCGACC TGCCGAAGGC GCGCCCGGAC CTGCCGGATC TCGAACGCTA CGCGATGAGC
AACCGTCTCG ACATCCAGGC CGCGAAGCTG CAGACGCAGG GCGTCGCGTC GTCGCTCGGA
CTCAGCAAGG CGACGCGCTT CGTCAACGCC GTCGATCTCG GCTACGTGAA CAACTACGAG
ACCGACAAGG GGCAAGAGCA CGGCTACGAG ATCAGCGTCG AGATTCCGCT GTTCGACTGG
GGCGGCGCGA AGGTCGCGCG GGCCGAGGCC GTCTACATGC AGTCGGCGAA CCGGCTCGCG
CAGACCGCGA TCGACGCACG CTCGGAAGTG CGCCAATCGT ACGCGGCGTA CACGACGAGC
TACGACGTCG CGACGCACTA TCGCGACGAA GTCGTGCCGC TGCGCAAGAC GATCTCGGAC
GAATTGCTGC TGCGCTACAA CGGGATGCTC GCGAGCGTGT TCGAGCTGCT CACCGATGCG
CGCGAACAGG TCGGCGCGGT CAACGGCTAC ATCGATGCGC TGAAGGACTA CTGGCTCGCC
GAAACCGATC TGCAGTTGGC CGTTGGCGGC CGGCTGCCTT CGCAGTCGAC CTCGCAGCCG
ACTTCGCAGC CGGCATCGCA GTCGACCTCG CAGCCACCCT CGCAGCCACC CTCGCAGCCA
CCCTCGCAGC CACCCTCGCA GCCCACGCCG CGCGCATCCA CGCCCGCCGC CTCAACGCCC
GACGCTGCAC CGCAGCCGGC TTCCTCTCCC GTGGCGCAAC CGGCGCCCGC AACGCATCCG
GAAGGTCATT GA
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| Protein sequence | MTRLAMSPRI GATALVLAFL AGCTTFSKDG GFDAVSSAAS ARIGKDAVIV RTDADRDAVD
ARTKELLAKP LSMDDAVQLA LLNNRGLQAS YAALGLSEAD LVQAGRLPNP RFSFSRTRAG
DGELSLGRTF SANVFALLTL PLATNIERRR FEQTKLETAD AMLKVAADAR RAYVEAVAAE
QAANYARQVR DAASAAAELA LRMRQAGNFS RLDYAREQAF HADAVAQQAK AQQQAVAERE
KLTRAMGLWG ERTRYALPER LPDLPKARPD LPDLERYAMS NRLDIQAAKL QTQGVASSLG
LSKATRFVNA VDLGYVNNYE TDKGQEHGYE ISVEIPLFDW GGAKVARAEA VYMQSANRLA
QTAIDARSEV RQSYAAYTTS YDVATHYRDE VVPLRKTISD ELLLRYNGML ASVFELLTDA
REQVGAVNGY IDALKDYWLA ETDLQLAVGG RLPSQSTSQP TSQPASQSTS QPPSQPPSQP
PSQPPSQPTP RASTPAASTP DAAPQPASSP VAQPAPATHP EGH
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