Gene Bamb_5184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5184 
Symbol 
ID4314075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2214628 
End bp2215638 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content67% 
IMG OID638153027 
Productsodium/calcium exchanger membrane region 
Protein accessionYP_777067 
Protein GI115359929 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGA TGCTCGTCGA ACTGGCGTTC ATGCTGATCG TCATCCTGGT CGCCGCCGAG 
TTCTTCACGA ATGCGCTCGA ACATCTCGGT GAACGGCTGA AGATTTCCGA AGGCGTCACC
GGTTCGCTGT TCGCGGCCGT CGGCACCGCG CTGCCCGAAA CGATGGTGCC GCTGCTCGCG
CTCGCGGGCG GCACGTCGAA TGCGGCCGTG AACGAGGAAA TCGGCGTTGG CGCGATTCTC
GGCGCGCCGC TGATGCTCGC GACGCTGACG ACCTTCCTGA TGACGATCGC CGTGATCCGC
TCGCGCGGCC TGACCGGCAC GATCAAGCCC GAGCGCACCG GCTTCGTGCG CGACCTGAAC
TACTTCATCG CCGCGTTCGC GCTCGCCACC GTCGCGATGT TCGTCCCGCA TCACGTGTGG
GGCGTCCGCG CGCTGCTCGC CGCGATGCTG GTCGGCATCT ACGTGCTGTA TGTCGTGATG
ACGTTCCGCG CGTCGACGCA GCTCGTCGAT GCCGGGCACG GCACCGAAGC GCCGCACGCG
ATGTTCCTGT CGCGCATCGG GCTGCCCACC AACCTCGCGA CCATCGCGCT GCAGCTCGCG
ATCGGCGTCG CGCTGCTCGT CGGCGGTGCG AAGGGCTTCA TTCATGGCGT CGAGGGCGTG
TCGCAGCTGC TCGGCATCTC CGCGCTGCTG CTGTCGCTGA TCATCGTGCC GATCGCCACC
GAGTTGCCCG AGAAGGTCAA CAGCGTGCTG TGGATCCGCC GCAAGAAAGA CACGCTCGCG
TTCGGCAACA TCACCGGCGC GATGGTGTTC CAGGGCACGC TGCTGCCGGC GATCGGCATC
ATGCTGACGC CGTGGGAGCC GCGCCCCGAA GTGCTGACCG GCGTGATCAT CACGCTCGCG
GCGGCGGCCT GGCTGCGCGT CAATGCCCGC GCGCACGGGC TCGCGATCTG GGCGTTGCTC
GCGAATGGGG CCGGGTACGT CGGCTATCTG TTCGTGACGT TGACGCGCTG A
 
Protein sequence
MTLMLVELAF MLIVILVAAE FFTNALEHLG ERLKISEGVT GSLFAAVGTA LPETMVPLLA 
LAGGTSNAAV NEEIGVGAIL GAPLMLATLT TFLMTIAVIR SRGLTGTIKP ERTGFVRDLN
YFIAAFALAT VAMFVPHHVW GVRALLAAML VGIYVLYVVM TFRASTQLVD AGHGTEAPHA
MFLSRIGLPT NLATIALQLA IGVALLVGGA KGFIHGVEGV SQLLGISALL LSLIIVPIAT
ELPEKVNSVL WIRRKKDTLA FGNITGAMVF QGTLLPAIGI MLTPWEPRPE VLTGVIITLA
AAAWLRVNAR AHGLAIWALL ANGAGYVGYL FVTLTR