| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5181 |
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| Symbol | |
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| ID | 4314072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2209422 |
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| End bp | 2210939 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638153024 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_777064 |
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| Protein GI | 115359926 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG0845] Membrane-fusion protein
[COG5569] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGC AAACGCTCGT CCGCGCCGTC CTGCTGGCGT GCGTCGCCGT GGCGCTCGTC
GGCGCGGGTT ACGTCGCGGG TGCACGCCGT GCGGCAAGCG CGGCGCCAGA GGCCGCCGCT
GCGTCGCCGG CTGGATCCGA CCCGACGTCC GGACGCAAGG TGCTGTACTG GCACGATCCG
ATGGTGCCGA ACCAGCACTT CGACAAGCCC GGGAAGTCGC CGTTCATGGA CATGCAGCTG
CAACCCGTCT ATGCGGACGA AGGCGGCGGC ACGTCGGGCG TTCGGATCGA TCCGGGCCTG
CAGCAGAACC TCGGCATCCG CTATGCGGCC GTCCGGCGTC AGGAAGCGGC CGTCGGATTC
GATGCGGTCG GCACCACCCA GTTCGATGAG GCGCGCACGG ATGTCGTGCA GTCGCGCGTG
ACGGGCTACA TCGATCGCCT GTACGCGCGG GCGCCGATGC AGCGCATCGA CAAGGGCGCG
CCGATCGCGT CGCTGTACGT GCCGGACTGG CTCGCGCCGC AGGAGGAATA CCTGGCGCTG
AAGCGCGGCG GGATGGACCG CGACCTGCTG GACGCATCGC GCGCACGCAT GCGCGCCCTG
TCGATTCCGG ACGGCATGAT CGCGAGTCTC GATCGCACGG GCCGCGTGCA GACCCACGTC
GTACTGTCCG CGCCGGAAAC CGGCGTCGTC AGCGAGCTGA ACGTGCGCGA CGGCGCAATG
GTCACGCCGG GGCAGACGCT CGCGAGGATT TCCGGTTTGT CGACGCTGTG GCTGCTCGTC
GAGATTCCCG AAGCGCTGGC GTTGAACGTG CAGCCGGGGA TGCAGGTCGA CGCGACGTTC
GCGGGCGATC CGTCGCGGCA CTTCGCGGGT CGCATCCGCG AGATCCTGCC GGGCATCAGC
ACGAGCAGCC GAACGCTGCA GGCGCGGCTC GAGATCGACA ACGCATCGCT GAAGCTGACG
CCCGGCATGC TGATGCGCGT GCGCGTCGCC GACCCGAAGG CGGCACCGCG TCTGCTCGTG
CCGTCGGAGG CGGTGATCGC CACCGGCAAG CGCACGATCG TGATCGTGAA GCGCGGCGAC
GGCAGCCTGC AGCCGGTGAC GGTGACGCTC GGCAACGACG TCGGCAGCGA TACGGAAGTG
CTCGCCGGGT TGAGCGACGG CGATACGGTC GTCGCATCGG GGCAGTTCCT GATCGATTCC
GAAGCGAGCC TCAAGTCCGT GCTGCCGCGA CTGGCAAGCA GCGCCGGCGC GAGCGGGGCC
GCGCCCGCGT CGGCACCGAA GGCGGCGACG ACTTATGAGA CCACCGGCAA GGTCGAAAGC
GTCACGGCCG ACGACATCAC GTTCTCGCAT CGGCCCGTGC CCGCGCTCGG CTGGGGCGCG
ATGACGATGA CCTTCGGCAA GCCGTCCGCG ACCGCGTTTC CGGACGTGAA GCCGGGCCAG
ACGGCGCGCT TCGCGTTCGT GCAGAGCGAC GACGGCTACC GGCTGACGAA GGTCGATCCG
CTGGGGGGCA AGCCATGA
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| Protein sequence | MTKQTLVRAV LLACVAVALV GAGYVAGARR AASAAPEAAA ASPAGSDPTS GRKVLYWHDP
MVPNQHFDKP GKSPFMDMQL QPVYADEGGG TSGVRIDPGL QQNLGIRYAA VRRQEAAVGF
DAVGTTQFDE ARTDVVQSRV TGYIDRLYAR APMQRIDKGA PIASLYVPDW LAPQEEYLAL
KRGGMDRDLL DASRARMRAL SIPDGMIASL DRTGRVQTHV VLSAPETGVV SELNVRDGAM
VTPGQTLARI SGLSTLWLLV EIPEALALNV QPGMQVDATF AGDPSRHFAG RIREILPGIS
TSSRTLQARL EIDNASLKLT PGMLMRVRVA DPKAAPRLLV PSEAVIATGK RTIVIVKRGD
GSLQPVTVTL GNDVGSDTEV LAGLSDGDTV VASGQFLIDS EASLKSVLPR LASSAGASGA
APASAPKAAT TYETTGKVES VTADDITFSH RPVPALGWGA MTMTFGKPSA TAFPDVKPGQ
TARFAFVQSD DGYRLTKVDP LGGKP
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