| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5180 |
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| Symbol | |
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| ID | 4314071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2208118 |
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| End bp | 2209410 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638153023 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_777063 |
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| Protein GI | 115359925 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTCG ATCTCTGCAC GCCGCACGCG CGGCGTGCGC GTCGGCGCGC GCCCATGCTT
GGAGCGGCGC TGCTGGTTGC GGGCGCCGCC CACGCGCAGT TGGCGCCTGT CACACTGGAC
GCCGCGCTGC AGTCCGCCAC CGAACATTCC GCGTCGATGC AGGCCGCACA GGCTTCCGTG
CGTGCCAGTT CCGAGGCAGC CGTCAAGGCC GGCCAACTGC CCGACCCATT GCTGAAGGCC
GGCATCGACA ATCTGCCGGT CAACGGCGGG CAGCGTTTCA CAGTCGGCCA GGACTTCATG
ACGATGCGCC GCATCGGCAT CGAACAGGAA TGGGTGTCGG GCGACAAGCG GCGCCTGCGC
ACGGCGCTCG CCAACGAACA GGTCGGGCGC GAGCGCGCCG GCTATCTCGC GCAACTCGCC
AGCGTGCGTC AGCAGACGGC CGCGGCGTGG CTGAACGCGA TCTACGCGAA GCAGGCGCTT
GCGCTTCAGC AGGTGTTGCT CGATCACATG AGCCATGAGC TCGAGGCGAT CAAGGCGTCG
TATCGCGGCG CGAAGGCAGG TGCGGGCGAC GTCGTCCAGG CGCGGGCGAT GCTCGCGCAG
ACCCAGGATC AGCTGCTGAA GGCGCAGGAG GCCTACCAGA CCGCGCGCAT CGCGTTGTCG
CGCTGGACCG CCGCGCCCGT CGACGACGTC GCGGGAACGC CGCCGGCCGC GGAATCGTTC
GTATCGTCGT TGCCGCCGGA TGAATTGCGG TTGTCGCAGC CGACGCTCAT CACCGCGGCG
GGCGACATCG CCGTCGCCGA AGCCGACACC GCGGTGGCGA ACAGCGAGCG CAGCCCCAAC
TGGACGTGGG AAGTCGCGTA CCAGCAGCGG GGCGGCGCGT ATTCGAACAT GGTGTCCTTC
GGCGTGACGA TCCCGCTGCC GCTGAACCGC AAGAACCGGC AGAACCGCGA CGTCGCCGAG
AAGGCCGCGC TCGCCACGAA AGCGGGGCTG ATGTACGAGG ACACGCTGCG CCAGGTGCAG
GCTGATATCC GCATGCAGTC GGCAACGCTC GCGAGCGGCC GCGCGCGGAT CGCGAACCTG
CGCGACGCGC TGCTGCCGGC CGCGGAGCAG CGCGTCCAGC TTGCCGACGC CGCATACCGG
GCCGGCACGG GGTCGCTCGC CGACACGTTC GCCGTGCGCC GCGCGCAACT CGATGCGCAA
CTGCAGGTGC TTGATGTTCG CCGCGAGGTT TCGCAGACCT GGGCGCGGCT CGAATATCAG
GTCGTGCCGC CGACCCTCGC CGCCGCACAA TGA
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| Protein sequence | MSFDLCTPHA RRARRRAPML GAALLVAGAA HAQLAPVTLD AALQSATEHS ASMQAAQASV
RASSEAAVKA GQLPDPLLKA GIDNLPVNGG QRFTVGQDFM TMRRIGIEQE WVSGDKRRLR
TALANEQVGR ERAGYLAQLA SVRQQTAAAW LNAIYAKQAL ALQQVLLDHM SHELEAIKAS
YRGAKAGAGD VVQARAMLAQ TQDQLLKAQE AYQTARIALS RWTAAPVDDV AGTPPAAESF
VSSLPPDELR LSQPTLITAA GDIAVAEADT AVANSERSPN WTWEVAYQQR GGAYSNMVSF
GVTIPLPLNR KNRQNRDVAE KAALATKAGL MYEDTLRQVQ ADIRMQSATL ASGRARIANL
RDALLPAAEQ RVQLADAAYR AGTGSLADTF AVRRAQLDAQ LQVLDVRREV SQTWARLEYQ
VVPPTLAAAQ
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