| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5171 |
|---|
| Symbol | |
|---|
| ID | 4314062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 2201569 |
|---|
| End bp | 2201973 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638153014 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_777054 |
|---|
| Protein GI | 115359916 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3631] Ketosteroid isomerase-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.182508 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC AAAGCAATGT GCAACTGGTG CAGGACGCGT ACGCGGCGTT CGGCAGGGGC
GACATCGGCG GCGTCCTGCA GACGCTGTCC GAAAACATCG ACTGGTTCAT CCCGGGGCCG
GCCGACGTCG TACCGTTCGT CGGCAGGAGA CGCGGGCCGC GGGACGTCGC GACGTTCTTC
GCTGCGCTTG CGGCGACGCA GACCGCGGAA CGGTTCGAGC CGCTCGAGTT CATCGCCAGC
GGCAAGCGGG TCGTCGTGCT CGGCACGCAG CGCTGGCATG TGCTGTCGAC CGGGCGCACG
TACGAGGACG ACTGGGTGCA CGTGTTCACG ATCGAAAGCG GGAAGATAGC GAAGTTTGCC
GAGTACCACG ATACCGCCGC CGAAGCGGCC GCACATCGTT ACTGA
|
|---|
| Protein sequence | MSEQSNVQLV QDAYAAFGRG DIGGVLQTLS ENIDWFIPGP ADVVPFVGRR RGPRDVATFF
AALAATQTAE RFEPLEFIAS GKRVVVLGTQ RWHVLSTGRT YEDDWVHVFT IESGKIAKFA
EYHDTAAEAA AHRY
|
|---|
| |