Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5153 |
Symbol | |
ID | 4314044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2183660 |
End bp | 2186668 |
Gene Length | 3009 bp |
Protein Length | 1002 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638152996 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_777036 |
Protein GI | 115359898 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.437111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACCA AACTGAAAGC GCTGATTGCG AACGCCACCG CCACCGCGGG ACGCAAGCCG TTCGAGCCGG GGCGCGTGCG CCGGCAGCAG CAATGGCTGC TGTACGCAAG CGGCGCGGCG ATCACGATGT TCGTGCTGGT GTGCACGGCA CTTGTCGCGC GACTCGACCT GCAGGAATCG CTTGCGCAGT ACCGATCGGG GTTCCTGATA CGCAAGGCGG AACTGCTGGC GGAGATGGAG GTGGTCAGGG CCCTCCAGAA TCGCTACGTC GAAAACCTCG AGCTGATCGC CAAGCATGGC GCGAGCGTGT CGCCCGATAC GCTCGGGCGG TTTGTCGACG ATCACGGCAG GATGGTTGCC GTCGGCCACG CGGGGCGTGT GGCATTTGCG GCTTTCGCGC TCGCTTCGTC ATCGCAACCG GAGAAGGCCT ACGCGCCGTT GCTTCTCAAG TTGCTCGCGC AGGGCGAGGT CACGGGCAAC ATGCCGCCGC AACAGGCCGG CGATCCGGGA ATGGGCGCGT ACATCATCGA TCCGGACGGC AATTTTGTCA TTGTGACGGG GTACCCGCTG GTCAAGCAGG TGCTGGCGCT GCCGGCCGGC TTCGACATCA AGGCATTGAT TCGGCAATTG CAACCGCCGC CCGACTTCGT GTCGATGGCG TCGGCATCGG ATAGCCGGGA GGTTCTGCTC GATCGGCGCG ACGACCCGCT GACCGGACGC TCGACGCTGC GGTTCGCACA GGCGGTGCGC GATCCGCAGG GCAAGCCGGT CGCATGGTTC GTCGCGGTCA GCCGGCCGGA GATCGACGAT TTTCTGCGTT CTTCGTCCGC CGGCAAGGAT TACGCGCTGG TCAGCCCGGC CGGGCAGGTT CTGACCGGCC GCGAGATCGA CCCTGCGCTG ACGGCCCGTG CGCTCGACTA TGCGCACAAG GCGGGCAGGG AACGGGCGGC TGCCCATCGC GTCGGCATGA ATATCGTCAT CGGCAACCGG ATGCCGGGGT TCCGCGAGGT GTTGACCGCG ACCTTCTCGT GGCGCAGCCT GTTCGATGAC ATGGCCGGCC GCCTGGGGGT CGCAATCGGT CTCGCGCTGC TGGCGATCGG AACGGTGTGG TTCGCGATCG TCATGTTCGA CCGACGCGCG TTGCGCCCGG CGAACCGTCG TGCAATCCGG CTGATCGAAA GCGAGGCGCT GAACCGCACG TTGATTCGCA CGGCGCCGGC CGGGCTCATG CTGCTGTCGC TCGCCAACGG CGACACCATG GTGCGCAACG AGGCCGCGCA GGCCTACGGC GACACCGATG CGGCAGCGTC GCTCGGCAAG CGCATCTGGC AGGCGTATCA CCGCAGTATC GCGGGCGGCC GGGCGCCGCG CGTCGTCACG CACGAATTGT CGGTCGACCT CGCCGGCGGC GGGACGACCT ATCTCGCCGC GCATATCGTC CGTACGCGCT ATCGCGGCGT CGACGTGTTG CTCTGCACGC TGACCGACAT CACCGCGCGC AAGCAGATGG AAGACAAGCT GCGCGAGGCC CGGGAGGCGG CGGACGATGC GAACAAGGCG AAGTCGACGT TCCTCGCGAC GATGAGCCAC GAGATCCGCA CGCCGCTGAA CGCGATCGTC GGCAATCTGG AATTGATGGA ACGCGCGCCG TTGCCGGCCG AGGAGCGGCG ACGCCTGCAG ACGGTGATGT CGTCGTCGGA TGCGTTGCTG CGCGTGATCA ACGACGTGCT CGATCTGTCG AAGGTCGAAT CCAATCAGAT GGTGCTGGAA GCCGTGCCGT TCGATTTGCG TGCGGTTGTG CGCGACGTCG CGGCGATCTT CCATCCGCTG GCCGCGGCCC GGCACCTCGC GCTCGAATGC AGGATCGACC CGCAACTGGC CGATGGCTAT GTCGGCGACC CGACTCGCCT GCGTCAGATC GTGTCGAATC TCGTCAGCAA CGCAATCAAG TTCACCGAGC GCGGCAGCGT GACGATCGAG GCGCGACCGA CGGGCACCGT CGGCCAAGCG CGCGGCGTCG AGGTGGTGGT GCGCGACACC GGTATCGGCA TCGCGCCGGA GAGCCTGCCG ACGTTGTTCG ACGTGTATGT CCAGACCGAT GCGTCGATCT ACCGGCGCTT CGGCGGCACG GGGCTCGGAC TGCCGTTGTG CCGGCGCCTC GCGCGGCTCA TGCATGGCGA CCTGGCGGTC GAAAGCCGGC CGGGCCAGGG CGCGACGTTC ATCGTGTCGC TGCCGCTGTC CGCCGCCCCG TCCGGATGGC GCGTCGCGTT CGACGAGACG AAATCCACCG CGTCGTCGTT GCCGGCATAT GCGGACGACG AGACTCCGCT GCGCGTGCTC GTTGCCGAGG ATCATCCGGC GAGCCGCGCG CTGCTGCGTG ATCAGCTCGA TGCGCTGCAT TGCGACGCCA TGCTCGTCGC GAACGGTGTC GAAGCGATGC GCGCGTTCTT CGCGCATCCG TTCGACGTGG TGCTGACCGA TCTCGGCATG CCGGAACTCG ACGGCTTCGC GCTGGCGAAC TTCCTGCGCG AGCAGGGCGC GAAGGTGCCG GTGATCGCGA TGACCGCGCA TGCGACCGAG GAGGATCGGC GGCGCTGCGA GCAGACGGGC GTCGCGGAGG TCGTGCTCAA GCCGCTGTCG ATCGATGCGC TCGACGCGGT GTTGCGGCGC CACGGAGGAC GCGGCGCGGC GGCGTCGCAT CCGATCGATC GTGCCGACCG GCCGGTGCCG CCCATGACGG ACGAGATACG CGAAAAATTG CATGCCTCGA CGCTGCACTC GCTGGCGAAG ATCGATGCCG CGTTGCTGCG CGGGGACATC GCGTGCGTCA GCGGCGAACT GCATTCGATG CGAGGCGGTT TCGCGCTGGC CGGCGACGTG GGCTCGAGCG ATGCGTGCGC GAAAGGCGAG CGGGTGCTGG CCGCGGGCGG TCTCGATGCG CTGAAGCTGG AATGGCCGGA GATACGCGTG GCGATGGAGG CCGCGCTGTC GAGATTGGCC GGCGTCTGA
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Protein sequence | MPTKLKALIA NATATAGRKP FEPGRVRRQQ QWLLYASGAA ITMFVLVCTA LVARLDLQES LAQYRSGFLI RKAELLAEME VVRALQNRYV ENLELIAKHG ASVSPDTLGR FVDDHGRMVA VGHAGRVAFA AFALASSSQP EKAYAPLLLK LLAQGEVTGN MPPQQAGDPG MGAYIIDPDG NFVIVTGYPL VKQVLALPAG FDIKALIRQL QPPPDFVSMA SASDSREVLL DRRDDPLTGR STLRFAQAVR DPQGKPVAWF VAVSRPEIDD FLRSSSAGKD YALVSPAGQV LTGREIDPAL TARALDYAHK AGRERAAAHR VGMNIVIGNR MPGFREVLTA TFSWRSLFDD MAGRLGVAIG LALLAIGTVW FAIVMFDRRA LRPANRRAIR LIESEALNRT LIRTAPAGLM LLSLANGDTM VRNEAAQAYG DTDAAASLGK RIWQAYHRSI AGGRAPRVVT HELSVDLAGG GTTYLAAHIV RTRYRGVDVL LCTLTDITAR KQMEDKLREA REAADDANKA KSTFLATMSH EIRTPLNAIV GNLELMERAP LPAEERRRLQ TVMSSSDALL RVINDVLDLS KVESNQMVLE AVPFDLRAVV RDVAAIFHPL AAARHLALEC RIDPQLADGY VGDPTRLRQI VSNLVSNAIK FTERGSVTIE ARPTGTVGQA RGVEVVVRDT GIGIAPESLP TLFDVYVQTD ASIYRRFGGT GLGLPLCRRL ARLMHGDLAV ESRPGQGATF IVSLPLSAAP SGWRVAFDET KSTASSLPAY ADDETPLRVL VAEDHPASRA LLRDQLDALH CDAMLVANGV EAMRAFFAHP FDVVLTDLGM PELDGFALAN FLREQGAKVP VIAMTAHATE EDRRRCEQTG VAEVVLKPLS IDALDAVLRR HGGRGAAASH PIDRADRPVP PMTDEIREKL HASTLHSLAK IDAALLRGDI ACVSGELHSM RGGFALAGDV GSSDACAKGE RVLAAGGLDA LKLEWPEIRV AMEAALSRLA GV
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