Gene Bamb_5144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5144 
Symbol 
ID4314035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2172037 
End bp2172456 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content65% 
IMG OID638152987 
Producthypothetical protein 
Protein accessionYP_777027 
Protein GI115359889 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.356001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGG CCATCACGCA CATCGGCGTT GAAACGCACG GGAGCGGCCT CGTCGAGTTC 
ACATCGCAGG CGCGTGCGTT CGTCGACCAG CAGGCAATCC GCACCGGGTT GCTGACCGTG
TTCTGCCGCC ATACGTCCGC GTCGCTGCTG ATCCAGGAGA ATGCGGATCC GTCGGTGCAG
CGCGATCTCG AACGCTACTT CGCGACGCTC GCGCCCGAGG ACGCCACGCG CTACGAGCAC
GACACCGAAG GGCCCGACGA CATGCCCGCG CATCTGCGCA CGGCGCTTAC GCAGGTGCAA
CTGTCGATCC CGGTCGAGCA TGGACGCATG GTGCTCGGCA CCTGGCAGGG CATCTATCTG
TTCGAGCATC GTCGCGCGGC GCATCGGCGC GACATCGTGC TGCATTTGAT CGGCGAATGA
 
Protein sequence
MQQAITHIGV ETHGSGLVEF TSQARAFVDQ QAIRTGLLTV FCRHTSASLL IQENADPSVQ 
RDLERYFATL APEDATRYEH DTEGPDDMPA HLRTALTQVQ LSIPVEHGRM VLGTWQGIYL
FEHRRAAHRR DIVLHLIGE