Gene Bamb_5120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5120 
Symbol 
ID4314011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2151773 
End bp2152582 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content70% 
IMG OID638152963 
Productredoxin domain-containing protein 
Protein accessionYP_777003 
Protein GI115359865 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.329832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCA TCGGTCCCTT CTCGATCCGC GTCGTCGCGG TAGCCGCCGC CGCGCTGATC 
GCATGGCTCG TCGCCCGTTT CATGCAGCGC CGCCCGCCGG ACGGCCAGCA CAAGAGCGCG
GCGAGCCTGA TCCTCGACAC GCTGCTGCTC GGCCTGATCG CCGCGCGCGT CGGTTACGTC
GGTCAATGGT GGTCCGAGTA TTCAGCCGCC CCGCGCTCGA TCGTCGCGCT CGGCGACGGC
GGCTTCGACT GGCGCATCGG CGTCGCCGCT GCGCTCGTGT TCGCCGGCTG GCGACTGCGC
CGCCTGCCCG CGCTGCGTCG CCCGGTGCTG GCCGGCATGC TGGCGGGGCT CGCCGCGTGG
GGCATCGCGC AAGGCACGCT CGCGACGTTG CAGCGCGGTG CGCCGCCGCT TGCCGCGCTG
CGACTCGAAA CGCTCGACGC GACGCCCGTC GCGCCGCAGC GCTTTGCCGG CAAACCCGTC
GTCGTCAATC TGTGGGCCAC CTGGTGCCCG CCGTGCCAAC GCGAAATGCC GATCCTCGCG
CAGGCGCAGC AGGATCATCC GGACATCACG GTGCTGATGG TCAATCAGGG CGAAGACGCG
CAGACCGTGC GCGCGTTCCT CGAACGGAAG GGGTTGCGGT TCGATCACGT GCTGCTCGAT
CGCACGCTGC ATACGATGAA GGCCTACGGT TCGCGCGGGC TGCCGACGAC GCTGTTCTTC
GACGCGAACG GCAATCTCGT CGAATCGCAC ATGGGCGAAA TCACCGCCGC GCGGCTGAAG
GACACCGTGA GCGCGGGCTT GCGCCCCTGA
 
Protein sequence
MLSIGPFSIR VVAVAAAALI AWLVARFMQR RPPDGQHKSA ASLILDTLLL GLIAARVGYV 
GQWWSEYSAA PRSIVALGDG GFDWRIGVAA ALVFAGWRLR RLPALRRPVL AGMLAGLAAW
GIAQGTLATL QRGAPPLAAL RLETLDATPV APQRFAGKPV VVNLWATWCP PCQREMPILA
QAQQDHPDIT VLMVNQGEDA QTVRAFLERK GLRFDHVLLD RTLHTMKAYG SRGLPTTLFF
DANGNLVESH MGEITAARLK DTVSAGLRP