| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5116 |
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| Symbol | |
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| ID | 4314007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2145708 |
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| End bp | 2147975 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638152959 |
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| Product | exopolysaccharide transport protein family |
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| Protein accession | YP_776999 |
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| Protein GI | 115359861 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0102406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGAA TTTCCATGAA CAAAGCACCG AACCCGTTAC CCGAAGCGGA CCTGGGCGAC
GAGCCGGAAC TCGTGCGGTA TGTCGATCTG CTGCTGACGA ACCGCTGGCT GGTGGCCGGC
ATCGCGGCGG TCGTGTTTGC CGCGGGCGCG GCGTATGCGT TGCTCGCGCG CCCGATCTAC
GCGTCGAATC TGCTGATTCA GGTCGAAGAC AGCACGGGCG GGTCCGACTC CCTGCTCGGT
AGCGTGTCGT CGCTTTTCGA CGGCAAGATC CAGGCGGCGG CCGAGATCGA GATCCTCCAG
TCGAGAATGG TGGTCGGCCA TGCCGTCAAG ACCCTGCGCC TGTATATCGA CGCGACGCCG
AAGCGCTTCC CGCTGATCGG CGAGGCGATC GCCGCGCGCG CACACGGCCT GTCCCGGCCA
GGTTTGTTCG GGTTCGGCGG ATACGGCTGG GGCACCGAGT CGATCGAGAT CGGCACGTTC
GACGTTCCGA AAACCTTCGA GGGCGACCGG TTCGAACTGA CGGCACTGCC CGACGGCCGC
TTCCGGCTGG AAAACGGCGA TCTCGACCGG CCGATCGAAG GCGCGCTCGG GCAGCTCGTC
GAATCGACGC AGGCCGGCGG CACGTTCCGG ATCCGCGTCG ATGCACTCCA CGCGCGGCCG
GGCGCGGTGT TCCAGGTCGA ACGTCATTCC GAACTGAAGA CGCTGCAGCG GTTGCAGAAA
CACCTGGCCG TGTCGGAGAT TCGCAAGCAG AGCAACGTCA TCAACGTGTC GCTGAAGGGC
GAAGACCCCG ACACAGTGGC GAACATTCTG AATACGATCG GCTCGGCGTA CGTCGCGCAG
AACGTCAAGC GGAAATCGGC CGAGGCGGAG AAGTCCCTCG CGTTCCTCGA GAACGTCGCG
CCGCAACTGA AACAGAACCT GGAACAGGCC GAAGCGAAAT ACAACGCGAT GCGGCGCAAG
CGCGGCACGT TCGACCTCGG CATCGAGGCG CAGGCCTACC TGCAGGACAG CATCGCAACC
CAGGCGACGC TGCTGGCGTT GCAGCAGAAG CGCGCGGAGG CGTCGACCCG GTTCGCGGCC
GGCCATCCCG AGATGCAGGC GCTGGATCGT CAGATCGATG GCGCGAAACG GAAGATCGAC
GGGCTGTCGG CGCGTCTGCG CGCGTTCCCC GATATCGAAC AGGACGAGCT CCGGCTTCGT
CGCGACGTCG AAGTCGGCAA CGAAATGTAT GTCGGGGTGC TGAACAATAT CCAGCAGCTC
AGGCTGGTGT CGGCCGGCAA GGTCGGCAAC GTTCGCGAAG TGGACAACGC AGCCGTCCCG
GAAGAGCCGG TCGAGCCGCG CAAGGCATTG ATTGTCGCGC TGTCCGCCAT TCTCGGCGTG
ATGCTGGGCG TCGCGGCGGC GGTCGCGCGT GAGGCGCTGT TCGGCGGCGT GAAGGACGCG
GCCGACATCG AGCGCCGCAC CGGATTGAGC GTCTACGGCA CGATCCCCGA TTCGCCGATG
CAACGGGGCG CAGCCGCATC GGCCGCGCGG CGCGGGACCA TCCCGTCGTT GCTGGCCAAC
GAGAACCCCT TCGACCCCGC CGTCGAGAGC CTGAAAAGCC TGCGCACGGC CGTCGGCCTC
ACCTTGCTCG ACGCAAACAA CAACCGGGTG CTGCTGACAG GGCCGAGCCC CGGTGTCGGC
AAGTCCTTCG TGTCGGCCAA TCTGGCGGCC GTGATGGCCG CCGCCGGCCA TCGCGTGCTG
CTGATCGATG CGGACATGCG GCGCGGTCAC CTGCACGATT CGTTCGGCGT GCGGAGCGCA
CCCGGGCTAT CGGACCTGCT GACAGGACGC GCCTCGTTGC AGGACGCCAC GCGGCGCGGC
GTCTCGAAAG GGTTGGACTT CATCCCGACG GGCGCCGCTT CGCAATCCAC CTCGGAGCTG
CTGCTGGGTG AATCGACGAC CCCGTTGCTC GACGAGATGA GCGCCACCTA CGACGTCGTG
ATCATCGACA CGCCGCCGGT GCTCGCGGTG GCGGACGCCA GCATTCTGGC GCCGCACTGC
GCGACGATCT TCCTCGTGAC CCGCGCGAGA CAAACGACGA TCGACGAGAT CGCCGAATCG
GCGAAGCAGC TGAACAGGAT TTCGTCGGGC TTGCTCGGTG TCCTCTTCAA CGGCATCGAC
ACGCGCGCAT TCGGCTATCG CACCCGATAC GGCGCGTATC GCTATGCGCC GTATGAAGCG
CCCGAAGCGA ACGACGCGTC CGCAACGCGC GAGCGGGAGG CGTCATGA
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| Protein sequence | MNGISMNKAP NPLPEADLGD EPELVRYVDL LLTNRWLVAG IAAVVFAAGA AYALLARPIY
ASNLLIQVED STGGSDSLLG SVSSLFDGKI QAAAEIEILQ SRMVVGHAVK TLRLYIDATP
KRFPLIGEAI AARAHGLSRP GLFGFGGYGW GTESIEIGTF DVPKTFEGDR FELTALPDGR
FRLENGDLDR PIEGALGQLV ESTQAGGTFR IRVDALHARP GAVFQVERHS ELKTLQRLQK
HLAVSEIRKQ SNVINVSLKG EDPDTVANIL NTIGSAYVAQ NVKRKSAEAE KSLAFLENVA
PQLKQNLEQA EAKYNAMRRK RGTFDLGIEA QAYLQDSIAT QATLLALQQK RAEASTRFAA
GHPEMQALDR QIDGAKRKID GLSARLRAFP DIEQDELRLR RDVEVGNEMY VGVLNNIQQL
RLVSAGKVGN VREVDNAAVP EEPVEPRKAL IVALSAILGV MLGVAAAVAR EALFGGVKDA
ADIERRTGLS VYGTIPDSPM QRGAAASAAR RGTIPSLLAN ENPFDPAVES LKSLRTAVGL
TLLDANNNRV LLTGPSPGVG KSFVSANLAA VMAAAGHRVL LIDADMRRGH LHDSFGVRSA
PGLSDLLTGR ASLQDATRRG VSKGLDFIPT GAASQSTSEL LLGESTTPLL DEMSATYDVV
IIDTPPVLAV ADASILAPHC ATIFLVTRAR QTTIDEIAES AKQLNRISSG LLGVLFNGID
TRAFGYRTRY GAYRYAPYEA PEANDASATR EREAS
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