| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5106 |
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| Symbol | |
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| ID | 4313997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2133657 |
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| End bp | 2134535 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638152949 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_776989 |
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| Protein GI | 115359851 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0140126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0019989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTTCTCG ATCATCTTCA TCCGGAACGC TGGACGTTCC TGTGGAACGC GTTGTCCACG
CTTTCGCTCA GGCTTTGCGC CGCCCTCGCG CTACTCGTCG CGGGCTGGTG GCTGTCGAAG
CGCATCGGCA ACTGGCTGAG CCGGCTGCTC ACGAACAAGG AGCGCGTGGA CGACACGCTG
CGGCCGATCC TCTGCGACGT CGCCGTATGG GGCATCCGCA TCGTCGCGAT CGTCGGTGCG
CTTTCACAGC TCGGCATCGA AACCGCGAGC ATCGTCGCGG TGCTCGGCGC GGCCGGCCTC
GCGATCGGGC TCGCGCTGCA AGGCACGATG CAGAACATCG CGGCCGGCAT CATGCTGTTG
CTGCTGCGGC CGTTCAAGGT GGGCGACTAC ATCGACGGCG GCACGGGTGT CGCGGGCACG
GTCGACGAGG TCGGGCTCTT CATGACGCGG CTGACGAAGC CGGACGGCAT CTGCGAATAC
GTGCCGAACA GCGCGCTGTG GGGCAGCGCG ATCCGCAACT ACACGCGCAA TCCGACCCGC
CGTCTCGATC TCGAAGTGGA AGTGTCCGTG CACGACGACA TCGATCGTGC GCTCGATGCG
CTGCGCGCGC TGGCCGAAAC CGATCCCGAC GTGCTGAAGG ATCCCGCGCC GGACGTGATG
GTGATGCGCT TCGACGACAG CACGGCGGTC GCGAACATGC GCGTATGGAC GCACACCGAC
AAGTTCTGGG CGATGCGCTG GCGCCTCGCG CGCCAGGTGC GCAAGACGCT CGCGGACGCG
GACTGCGCGC TGCCGATCCG CACGCGCGAG CTGCACATCG TGCACGACGT CGAACGGCAG
CCGCAGCAGA TCGAGCCGCG CCGCGTACAG GCGTCGTGA
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| Protein sequence | MFLDHLHPER WTFLWNALST LSLRLCAALA LLVAGWWLSK RIGNWLSRLL TNKERVDDTL
RPILCDVAVW GIRIVAIVGA LSQLGIETAS IVAVLGAAGL AIGLALQGTM QNIAAGIMLL
LLRPFKVGDY IDGGTGVAGT VDEVGLFMTR LTKPDGICEY VPNSALWGSA IRNYTRNPTR
RLDLEVEVSV HDDIDRALDA LRALAETDPD VLKDPAPDVM VMRFDDSTAV ANMRVWTHTD
KFWAMRWRLA RQVRKTLADA DCALPIRTRE LHIVHDVERQ PQQIEPRRVQ AS
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