| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5098 |
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| Symbol | |
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| ID | 4313989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2126130 |
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| End bp | 2127527 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152941 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_776981 |
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| Protein GI | 115359843 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.562365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.050377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC CGACCGCCAC GCCCTTCAGC GCGCTGCCGC TCACGCCCGC CGCGCTCGCG
AACCTCACGC AGCTCGGCTA CGTCGACATG ACGCCGATCC AGGCCGCGAG CCTGCCGATC
GCGCTGGCCG GCCACGACCT GATCGCGCAG GCGAAGACGG GCAGCGGCAA GACCGCCGCG
TTCTCGCTCG CGCTGCTGGC GCGCCTCGAC ACGCGCCGCT TCGACGTGCA GGCGATGGTC
CTGTGCCCGA CGCGCGAACT CGCCGACCAG GTCGCGCAGG AAGTGCGCCG CCTCGCGCGC
GCCGAGGAGA ACGTGAAGGT GCTGACGCTG TGCGGCGGCA CGCCGATGCG TCCGCAAGCG
CAGAGCCTCG AACACGGCGC GCACATCGTC GTCGGCACGC CCGGCCGCAT CATGGATCAC
CTCGACCGCG GCAACCTGAA GCTCGACGCG CTGAACACGC TCGTGCTCGA CGAAGCCGAC
CGGATGCTCG ACATGGGCTT CTTCGACGAC ATCGCGAAAG TCGCGCGGAT GTGTCCGACG
ACGCGCCAGA CGCTGCTGTT CTCGGCGACC TATCCGGACG GCATCGCGAA GCTGAGCCAG
CAGTTCCTGC GCAATCCGAA GGAAGTGAAG CTCGAGGAGC GCCACGACAA CAGCAAGATC
CGTCAGCGCT TCTACGAAGT GGCGGAAACC GAACGTCTGC ATGCGGTCGG CCAGTTGCTG
AACCACTACC GGCCGGTGAG CACGATCGCG TTCTGCAATA CCAAGCAGCA ATGCCGGGAC
TTGCTCGACG TGCTGCACGC GCAGGGCTTC CACGCGCTCG CGCTGCACGG CGAGCTCGAC
CAGCGCGAGC GCGACCAGGT GCTGATCCAG TTCGCGAACC GCAGCTGCTC GGTACTGGTG
GCCACCGACG TCGCCGCGCG CGGGCTCGAT ATCGCGCAGC TCGAGGCGGT GATCAACGTC
GACGTGACGC CCGACCCCGA GGTGCACGTG CACCGTATCG GCCGCACCGG CCGTGCTGAT
CAGGAAGGCT GGGCGCTGAG CCTCGCCAGC ATGGACGAGA TGGGTCGCGT GGGCGCGATC
GAGCAGGCGC TGAAGCGCGA AGTCGAATGG CATCCGCTGG CGGAACTGAA GCCGGCCGGC
AACGACACGC TGCTGCCGCC GATGGAAACG CTGCAGATCC TCGGCGGGCG CAAGGACAAG
ATCCGCCCGG GCGACGTGCT CGGCGCGCTG ACCGGCGATG CGGGGTTCGA CGGCAAGCAG
ATCGGCAAGA TCAACGTGAC CGAGTTCTCG ACGTATGTCG CGATCGAGCG CGGCGTCGCG
CACGACGCGC TGCGCAAGCT CAATGCGGGG AAGATCAAGG GCAAGCGGGT CAAGGTCCGG
TTGATGGACG AGGAGTAA
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| Protein sequence | MTEPTATPFS ALPLTPAALA NLTQLGYVDM TPIQAASLPI ALAGHDLIAQ AKTGSGKTAA
FSLALLARLD TRRFDVQAMV LCPTRELADQ VAQEVRRLAR AEENVKVLTL CGGTPMRPQA
QSLEHGAHIV VGTPGRIMDH LDRGNLKLDA LNTLVLDEAD RMLDMGFFDD IAKVARMCPT
TRQTLLFSAT YPDGIAKLSQ QFLRNPKEVK LEERHDNSKI RQRFYEVAET ERLHAVGQLL
NHYRPVSTIA FCNTKQQCRD LLDVLHAQGF HALALHGELD QRERDQVLIQ FANRSCSVLV
ATDVAARGLD IAQLEAVINV DVTPDPEVHV HRIGRTGRAD QEGWALSLAS MDEMGRVGAI
EQALKREVEW HPLAELKPAG NDTLLPPMET LQILGGRKDK IRPGDVLGAL TGDAGFDGKQ
IGKINVTEFS TYVAIERGVA HDALRKLNAG KIKGKRVKVR LMDEE
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