Gene Bamb_5091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5091 
Symbol 
ID4313982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2117553 
End bp2118911 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content71% 
IMG OID638152934 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_776974 
Protein GI115359836 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.524897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACA TCACGCCTAC CCTTGCAACG GATCGCGCAC CGCGCGTGCC GCGCATCGTG 
ATCGTCGGCG GCGGCGCCGG CGGCCTGCAG CTCGCCACGC GCCTCGGCGA CACGTTGGGC
CGCCGCGGGC AAGCCGACGT CGTGCTCGTC GACCGCTATC CGACGCACTT CTGGAAGCCG
CTGCTGCACG AAGCCGCGTC CGGCCATCGC GATCCGGCGT CGCACACGAT CGAATACGCG
GCGCAGGCGA AGCGCCACGG CTTTCGCTTC GTGCAGGGCG CGCTGCACCG GGTCGACCGC
GCGGCACGCA CGGCGACGAT CGCCGCGGTG CAGGACGCGG ACGGCACGGA GATCCTGCCG
CAGCGCGCGC TCGGCTACGA CGATCTCGTG CTGGCCGTCG GCAGCGTGAC GAACTTCTTC
AACGTGCCGG GCGCCGCGCG CCACGCGTTG CCGCTCGAAA ACCTCGACCA GGCCGAGGAT
TTCCGCCGCA AGTTCCTCGC CGCCTGCACG AAGGCGAACC ATGTGGCCGA GCAGCAACCG
GCGCGACCCG CGGCACCGAT CTGCATCAAC GTGATCGGCG CGGGCGCGAC GGGCGTCGAA
CTGGCCGCGG CGCTGCGCCA CGCGATCCAG CAGCTGACGA CGTATCGCTT CAAGGCGCTG
GTGTCCGCAC GCGACGTGCA CATCCGCCTG ATCGAAGGCG GCCCGCGCAT CCTGCCGGCG
CTCGACGCAC GGCTGTCGGC CAGGATGCAC GCGCAGTTGC GCACGCTGAA CGTCGACGTG
CTGACGGATA CGCGCGTCGC GGAAGTCGGC GCGGATGCGG TCACCACCGC AACCGGCGAG
CGACTCGCGA GCGACATCAC GATCTGGGCG GCCGGCGTCG CGGGCCCCGC GATCCTGCGG
GAACTCGGCG ACATCGCGCT CAACCGGTCG AACCAGGTGA TCGTGACCGA TACGCTGCAG
ACGCCCGACG ATCCGCATGT GTATGCGTTC GGTGACTGCG CCGCGTGCCC GTCGGCCGAT
GCGAGCGGTT TCCTGCCGCC GCGCGCGCAG GTCGCGCACC AGCAGGCCGT GTACCTCGGC
GAAGCGCTCG CGCGGCGCCT CGCCGGCAAG CCCGTCGCGG GCTTCACGTT CCGCGACGCG
GGCACCGTCG TGTCGCTCGG CCAGGCCGGC GCCGTGTATC AGGGCGACCT CGGCGTGCGT
TCGCGCTCGC TGATCGTCGA CGGGCTCGCC GCGATCGGGC TGTACAAGTT CCTGTACCGC
AAGCACCTGT TCAGCGTGTA CGGACTGAAG CGCGCACTGT TCCAGTCGCT GAGCCACTGG
CTGCAAAGCC GCAACCAGCC GTCGATCAAG CTGCACTGA
 
Protein sequence
MDNITPTLAT DRAPRVPRIV IVGGGAGGLQ LATRLGDTLG RRGQADVVLV DRYPTHFWKP 
LLHEAASGHR DPASHTIEYA AQAKRHGFRF VQGALHRVDR AARTATIAAV QDADGTEILP
QRALGYDDLV LAVGSVTNFF NVPGAARHAL PLENLDQAED FRRKFLAACT KANHVAEQQP
ARPAAPICIN VIGAGATGVE LAAALRHAIQ QLTTYRFKAL VSARDVHIRL IEGGPRILPA
LDARLSARMH AQLRTLNVDV LTDTRVAEVG ADAVTTATGE RLASDITIWA AGVAGPAILR
ELGDIALNRS NQVIVTDTLQ TPDDPHVYAF GDCAACPSAD ASGFLPPRAQ VAHQQAVYLG
EALARRLAGK PVAGFTFRDA GTVVSLGQAG AVYQGDLGVR SRSLIVDGLA AIGLYKFLYR
KHLFSVYGLK RALFQSLSHW LQSRNQPSIK LH