| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5086 |
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| Symbol | |
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| ID | 4313977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2112002 |
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| End bp | 2113642 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638152929 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_776969 |
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| Protein GI | 115359831 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCGCG CCAATCCATC GACCGGTTCG ACCTGCATTG CCATGCATAC AACAACAAGC
GCGATCGGAG AATCAGCCCC GCCGGGCTCA AAACCCGCGT TCCAGCGCAG CGGTGCGTGG
CCGCATATCG TCTTCTCGCT TGCGTTGATC ATCTGCATCC TCGTGCTCTT GATGGCGCTC
GTCGTGGCCG AACGCCTCGC ACGCGAATCG GTAGCCGAGC ACGAACGCGT CGTCGCGAAC
GACATCGTGA TCTCGGTCGA CCGCATCCTC GACGGCGTGC GCTCGCGGCA CCCGGCCGAA
TTGACCGCGC TGGTCGGGCG ACCCTGCGCG ACAGTCTTCA GGACGCTCGC CGAAGTAGGC
ACTCACCTGC GCTATCTGCG CGCCGTCGCG CTGGCCAACG ACGGTCGCGT CACGTGCTCG
TCGGCGCTGG GCTCGATCGA CGTGTCGCTG GACGCGTATG TGCACGCCCC GCCACCGGGG
ATGACGGCCA TCACGCTGCT TCGGCAGACC CCGTTCCAGC ATCGCGTCCC GGTGCTGGCG
GTGTTTCGTG CAACCGCGCC CGCCTCGGGC GTGCTTTATC TGATCGAAGG CGACTATGTG
GCCGACATGC TGTCGCACGG CGCGCGCTTC GGCGCGGAAA CCGCGATGCT GTCGGTCAAC
GGCGCGGGCG GTCTCGATCA GCATGGCGAG TTCGTGCCGG CGTTCCACGC GGCCCCGTCG
GCCGGCAGCA CGATCGCCTC GGGCGCGTGG CCGTTCACGG TTTCCGTCAC GTCGTCGGAA
TCCTATGTTC AGCAGGTGGA ACGGCACTAT CGGCTGATTT GCGTGACGAT CGCGCTGCTG
GTGAACGGCC TCGTCGCGGC CGCGTACCTG CTCGCGATGG CGCCGCGCCG GCTGTTGCTG
AAGGCCGTGC GCAACGCGTT GAAGCGCAAC GAGCTTCACG TCGTGTATCA GCCGATCGTC
GACGTCGAAA CGCGCAGGAC CATCGGCGTC GAGGCGCTGC TGCGCTGGCA TCATCCGAAA
TGGGGGCTGA TCAGCCCGGC CGTGTTCGTC CCGCAGGTCG AATCGAGCGC GATCCTGCCG
AAGGTGACCG AGTTCGTGCT GCGCACGGCC GTGTCGGAGC TGACCGCGCT CACGCCGGCG
ATGCCGCTGC GCATCGCGAT CAACGTCGCG CCGAAGGATC TCGAACGCCC GCGCTTCGTA
TCCGTCGTCG AAGACGCGAT CCGCGGGCTT CCGCCGGGGT TCACGCTGGT GCTCGAAGTG
ACCGAGCGCA TCCTGCTCGA AAAGAATGCG CGCACCACCG CGATGTTTGC CGCGCTGCGC
GCGACGGGCG CGCGATTCGC GATCGACGAT TTCGGCACGC ATCACAGCAA CCTCGACATG
CTGTCGCGCT TTCCGTTCGA CTACGTGAAG ATCGATCGCC AGTTCATTTC GCAGCTGACG
ACCGGCAATG CCAGGCTGAT CGAAGGCATC GCGGCCGTCG CGCACCACTA CGAGCTGAAG
ATCATCGCCG AGGGCGTGGA GACGGAAGAG CAGCATCGCG CGCTGCATGC GGTCGGGATT
CAGTATGCAC AGGGCTACCT GTATCAGCGG CCGCAGCGGC CGACCGACCT GAAGCGGGAT
TTCGCGCCGA TGCCGGCTTA G
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| Protein sequence | MLRANPSTGS TCIAMHTTTS AIGESAPPGS KPAFQRSGAW PHIVFSLALI ICILVLLMAL
VVAERLARES VAEHERVVAN DIVISVDRIL DGVRSRHPAE LTALVGRPCA TVFRTLAEVG
THLRYLRAVA LANDGRVTCS SALGSIDVSL DAYVHAPPPG MTAITLLRQT PFQHRVPVLA
VFRATAPASG VLYLIEGDYV ADMLSHGARF GAETAMLSVN GAGGLDQHGE FVPAFHAAPS
AGSTIASGAW PFTVSVTSSE SYVQQVERHY RLICVTIALL VNGLVAAAYL LAMAPRRLLL
KAVRNALKRN ELHVVYQPIV DVETRRTIGV EALLRWHHPK WGLISPAVFV PQVESSAILP
KVTEFVLRTA VSELTALTPA MPLRIAINVA PKDLERPRFV SVVEDAIRGL PPGFTLVLEV
TERILLEKNA RTTAMFAALR ATGARFAIDD FGTHHSNLDM LSRFPFDYVK IDRQFISQLT
TGNARLIEGI AAVAHHYELK IIAEGVETEE QHRALHAVGI QYAQGYLYQR PQRPTDLKRD
FAPMPA
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