| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5085 |
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| Symbol | |
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| ID | 4313976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2110236 |
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| End bp | 2111828 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638152928 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_776968 |
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| Protein GI | 115359830 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCAG ACCAGCCGCA GCCCATCCCT TCGGACCCAC CGCCGGCCCA GCACGAGCAG
CCGCTGCTCG ACCGCTATGC GGAGTTCCGC TTCCAGACGG TCGTCGCGTC GATCACCGAC
TACGCGGTGT TCATGCTCGA CCCGCACGGC AACATCGCGA CATGGAACGC GGGCGCCGAG
CGCATCAAGG GTTTCCGGAC GGACGAAATC ATCGGCAGCC ATTTCTCGCG CTTCTATCCG
GCCGATGCGA TCGCGGCCGG CCGCCCGGCG CACGCGCTCG AAGCCGCCGC CGCGTACGGT
CACTTCCAGG ACGAAAGCTG GCGCGTGCGC AAGGACGGTT CGCGGTTCTG GGCCAGCGTG
ACCATCACGG CCGTACGCGA CGAGTCGCAT CAGTTGCGCG GCTTCATCAA GATCACGCGC
GACATGACCG AGCGCAAGCG CGTGGAGGAA CTCGAAGCGG CCACGCGGCG GCTGGACGTC
TTCATCGCGA CGCTCGCGCA CGAGCTGCGC AACCAGCTCG CGCCGCTGCG GCATACGATC
GGCATCCTGC AAGGCCTGCC GTCGTCCGAA CTGGGCCCGG CGCTCACGCA ATGCAAGGAC
ATCGCGGATC GCCAGATCGA ACAGCTCGTG CGGCTCGTCG ACGATCTGCT CGACATCGGA
CGCATCAAGT CCGACAAGGT GGATCTGAAG AAAGCGCCGG TGAACGTGCG CGATATCGTG
TACCGCAGCG TGCAGGGCAT TCAGCCGAAG GTCGACGCGC GCGGGCAGCG GATCATCGTG
CGGCTGCCGC CCGCGCCCGT GATCGTTCAC GGCGACGACG TCCGGCTCGT CCAGGTGCTG
TACAACCTGC TCGACAATGC GTCGAAGTAT TCGCCGAACG GCGAGCGCAT CGAGCTCCAC
GTGCGCACCG AACAGAACGT GGTTGCGATC GAGATCGTCG ATTACGGGAT CGGCATCGTG
CCCGGCGCGC AGGAATCGAT CTTCGACCCG TTCGAGCAGG AGCATGCCGC GGAGCGCCAC
GCACCCGGCG GGCTCGGGCT GGGGCTCGCG ATCAGCAAGA AATTCGTCGA CCTGCATGGT
GGCGGCATCA CGGCCGACAG CGCCGGGATC GGCGCGGGGT CGACGTTTAC CGTCCGGCTG
CCGATCGCGG AATCGAATCG TGCGGTCGAG CATGTGCAAA AGGTGCCGGC GCCATCCTCC
ACGCATGCGC TGCGCATCCT GATCGTCGAC GACAACCGCG AATCGGCCGA CACGCTCGCC
ATCCTGATGC AGATCAAGGG CCACACGTCC CGTGTCGCGT ACCACGCGCG CGATGCGCTG
CCGCTCGCCC GCGAGTTCGC GCCGCATCTG ATGCTGATCG ACCTCAGCAT GCCGGACGTC
AGCGGCTTCG AGCTGCTCCA CGCGTTGCGC TCGACCGGCG CCGCGCCCGA TTCGTACTAT
GTCGCGCTGT CCGGACATGT GCGGTCGTCG GACCGACAGG ACACCACGGA CGCCGGCTTC
CACGATCATT TCGCGAAGCC GATTCCGATC GAGGCGCTGG ACAGCCTGCT CGCGCGCGTG
GAGGACGATG CGCGGCGCCG CGGCCGGCTG TAA
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| Protein sequence | MTPDQPQPIP SDPPPAQHEQ PLLDRYAEFR FQTVVASITD YAVFMLDPHG NIATWNAGAE
RIKGFRTDEI IGSHFSRFYP ADAIAAGRPA HALEAAAAYG HFQDESWRVR KDGSRFWASV
TITAVRDESH QLRGFIKITR DMTERKRVEE LEAATRRLDV FIATLAHELR NQLAPLRHTI
GILQGLPSSE LGPALTQCKD IADRQIEQLV RLVDDLLDIG RIKSDKVDLK KAPVNVRDIV
YRSVQGIQPK VDARGQRIIV RLPPAPVIVH GDDVRLVQVL YNLLDNASKY SPNGERIELH
VRTEQNVVAI EIVDYGIGIV PGAQESIFDP FEQEHAAERH APGGLGLGLA ISKKFVDLHG
GGITADSAGI GAGSTFTVRL PIAESNRAVE HVQKVPAPSS THALRILIVD DNRESADTLA
ILMQIKGHTS RVAYHARDAL PLAREFAPHL MLIDLSMPDV SGFELLHALR STGAAPDSYY
VALSGHVRSS DRQDTTDAGF HDHFAKPIPI EALDSLLARV EDDARRRGRL
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