| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5073 |
|---|
| Symbol | |
|---|
| ID | 4313964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 2097208 |
|---|
| End bp | 2098158 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638152916 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_776956 |
|---|
| Protein GI | 115359818 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTCGA TCGATCGACG AGACTCGACT CCCCAATTGC TGAACCGGCT GCGGATGCGG
CAGATCGCGC TGCTGCTCGC GGTGGATGAA TGCTCGACGC TGCGCGCGGC CGCCGGGCAG
CTGGGCCTCA CGCAGCCGGC CGCGACGAAG ATGCTGGCCG AGCTGGAAAG CGCGCTCGGC
CAGCGGCTGT TCGACCGCGT CGGGCGCGGG CTCGTGCTGA ACCCGGCCGG CGAGCGCGTG
CTCGGCTATT TCCGCGGGAT TCGCGGCAGC ATGGAGGCGC TCAATCGCGA GCTCGGCGAG
CTGCAGCTCG GCAGCGCGGG GCGGCTCGCG ATCGGCAGCA TCATGGCCGC GTCGCCGGGG
CGGCTCACCG AGGCGCTGGT GCAGTTGAAG GCGCGTTATC CGCTGCTCGC GATCGACATC
GCGGTCGATA CCAGCGACCG GCTGATGCCG CAGTTGCGCG AAGGCGTGCT CGAAGTGGTG
ATCGGACGCA ACGTCGGCAC CGATTGCGAC TTCCGTGTGG TGGATGACGA GGCGCTCGCG
ATCATCGCGG GCCGCGACCA TCCGCTCGCC GGCGCCGGGC CGGTCGAATT CGACGCGCTG
CTCGATTACA CGTGGATCCT GCAGCCGGCC GGCAGCCCGG CGCGCGAGGT CGTCGAGCGC
GAGTTCCGCG CGCGTCACCA GCCTATGCCT CGGGGCCTCG TCGAGACGGG CTCGATCCTG
ACGACGATGA ACCTCGTCGA CCGTTCGCAC ATGCTCGGCG TGATTCCGCT GACGGTCGCG
CAGCGCAACG CGGAGCACGG GCTCGTGGCG ATCCTCGATT ACGAGCTCGG CCAGAAGCTG
CCGTCGTACG GGAGTCTCGT GCGGCGCGAC CGGCCGCTGA GCATTCCCGC GCAGCAGTTT
CTCGCGCTGT TCCACCGGGA AGGCGGGCCG GGCGATGACG GCGGCGCGTA A
|
|---|
| Protein sequence | MGSIDRRDST PQLLNRLRMR QIALLLAVDE CSTLRAAAGQ LGLTQPAATK MLAELESALG
QRLFDRVGRG LVLNPAGERV LGYFRGIRGS MEALNRELGE LQLGSAGRLA IGSIMAASPG
RLTEALVQLK ARYPLLAIDI AVDTSDRLMP QLREGVLEVV IGRNVGTDCD FRVVDDEALA
IIAGRDHPLA GAGPVEFDAL LDYTWILQPA GSPAREVVER EFRARHQPMP RGLVETGSIL
TTMNLVDRSH MLGVIPLTVA QRNAEHGLVA ILDYELGQKL PSYGSLVRRD RPLSIPAQQF
LALFHREGGP GDDGGA
|
|---|
| |