| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5071 |
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| Symbol | |
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| ID | 4313962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 2094783 |
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| End bp | 2095955 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638152914 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_776954 |
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| Protein GI | 115359816 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.435068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC GCTCCGTGCG CGCCCGCGTA TTCCAGTGGA AAGGCAAGAC CGTCCCGCCG
CAGGGCAACT TCTGCTCGAA CGCGATGGAC CTGCTGTACG CGCCGCAGGA AACCATGAGC
ACGTTCCGCT TTCATGCGTG GACCGTCGTC GAAGTCGAGA CCGACGACGG CGTCGTCGGC
CTCGGCAACG TCGCGCTCGC GCCGCACATC GCGAAGGCGA TCATCGACCA GTACCTCGCG
CCGCTTGTGA TCGGCCAGGA CCCATGGGAC TACGAGTACC TGAACCAGCG GATGTACCGC
GCGACCCACG CGTGGGGCCG CAAGGGCATC GGCATGGCGG CGATCTCGGC GGTCGACATC
GCGATCTGGG ACATCCTCGG CAAGAGTGTC GGCAAGCCCG TGTTCAAGCT GCTCGGCGGC
CGCACGAAGG AAAAGATCCC CTGCTATTAC TCGAAGCTCT ACCGCACCGA CCTGAAAGAG
ATGCAGGACG AGGCGCAGCG CTATATGAAG GAAGGCTTCC GCGCGTTCAA GATGCGCTTC
GGCTACGGGC CCGCGCACGG GCAGCAGGGC GTGGTGGAGA ACCTGAAGTC GGTCGCGGCG
ATCCGCGAGG TGATCGGCTA CGACAACGAC CTGATGCTCG AGTGCTACAT GGGCTGGAAT
CTCGAGTACG CGAAGCGCAT CCTGCCGAAG CTCGAGAAGT ACCAGCCGCG CTGGCTCGAG
GAACCGGTGA TCGCCGACGA CATCGACGGC TACGCGGAAC TGAACCAGCT CACGCGCATT
CCGATCTCCG GCGGCGAGCA CGAGTTCTCG CTGTACGGCT TCAAGCAGCT GCTCGACCGC
AAGGCCGTGT CGGTCGTGCA GTACGACACG AACCGCGTCG GCGGGATCAC GATGGCGCAC
AAGATCAATG CGCTGTGCGA GGCGTACAGC GTGCCGGTGA TTCCGCATGC GGGCCAGATG
CACAACTATC ACCTGACGAT GAGCACGCTC GCGTCGCCGA TGAGCGAATA CTTCCCGATG
TTCGACGTCG AGGTCGGCAA CGAGCTGTTC TATTACATCT TCGACGGCGA GCCGGTGGCC
GAGAACGGCT TCCTGCAATT GCGCGACGAC GTGCCGGGCC TCGGTCTCAC GCTGAAGACC
GAGTTCCTCG ACCAGTTCGA CATCGTCGAG TGA
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| Protein sequence | MKIRSVRARV FQWKGKTVPP QGNFCSNAMD LLYAPQETMS TFRFHAWTVV EVETDDGVVG
LGNVALAPHI AKAIIDQYLA PLVIGQDPWD YEYLNQRMYR ATHAWGRKGI GMAAISAVDI
AIWDILGKSV GKPVFKLLGG RTKEKIPCYY SKLYRTDLKE MQDEAQRYMK EGFRAFKMRF
GYGPAHGQQG VVENLKSVAA IREVIGYDND LMLECYMGWN LEYAKRILPK LEKYQPRWLE
EPVIADDIDG YAELNQLTRI PISGGEHEFS LYGFKQLLDR KAVSVVQYDT NRVGGITMAH
KINALCEAYS VPVIPHAGQM HNYHLTMSTL ASPMSEYFPM FDVEVGNELF YYIFDGEPVA
ENGFLQLRDD VPGLGLTLKT EFLDQFDIVE
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