Gene Bamb_5067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5067 
Symbol 
ID4313958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2090556 
End bp2091497 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content72% 
IMG OID638152910 
Productamidohydrolase 2 
Protein accessionYP_776950 
Protein GI115359812 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCTCGC AGGCGCGCGC TGAGCGGCGC GGCGACGCGC TGCCGGCGGC GCTCGTCGAT 
GCGCATCATC ACCTGTGGCA GCTCGACGCG GGTGCGCACT ACCCGTGGCT GCAGGAACGC
TACGACCCGG CGCGCTTCAT GTTCGGCGAC TACGCGGCTC TGTGCCGCGA CTTCGGCGTG
GACGACTACC GGCATGCCGC ACAACGCGCG CCGATCGTCG CGAGCGTGCA CGTCGAGGCC
GAACGGGCAC GCGACGAGGC GCTCGCGGAA ACGCGCTGGC TGCACGAGGT CGCGGCCGCG
CACGGACTGC CGTCGGCGGT CGTCGCGTGG GTCGACCTGC TGGCCGACGA TGCGCACGAG
CGGCTCGCCG AACAGGCCGC GTGGCCGCGC GTGCGCGGCG TGCGGTTCAA GCCGCGCACC
GCCGCGGCGC CGGATGCGTC CGTCGACGGG CCGGGCACGC TGCGCGATCC GCGCTGGCCG
GCCGCGCTGG AGCGGCTCGC CGCGCATGGC CTCGGCTGGG ATCTGCGCGT GCCGTTCTGG
CATCTCGGCG ACGCGGCCGC GCTGCTGGCC GATGCGCCCG GCATCGACGT CGTGCTCGAA
CACGCGGGGC TGCCGTGGGA TCGCTCGGAA GCGGGGCTCG CGCGCTGGCG CAGCGGCATG
GAAGCATTGG CCGCATCGCC GCGCGTGACC GTGAAGATCT CCGAACTCGG CTTGCGCGAT
GCGGTGTGGA ACGAGGCCGA CAACGCGCGG ATCATCCGCG ACACGATCGC GATATTCGGC
TGGCAGCGCT GCCTGTTTGC GAGCAATTTT CCGGTGGCGG GGTTGCGCGT GTCGTATCCG
GCGCTGCTGC GTACGTTTGC CCGCGCGATG GCGGACCTCG ACGACGCGGC GCGTCAGGCG
ATCTGGCACG ACAACGCGAT GCGCGTGTAC CGGATTGCGT GA
 
Protein sequence
MCSQARAERR GDALPAALVD AHHHLWQLDA GAHYPWLQER YDPARFMFGD YAALCRDFGV 
DDYRHAAQRA PIVASVHVEA ERARDEALAE TRWLHEVAAA HGLPSAVVAW VDLLADDAHE
RLAEQAAWPR VRGVRFKPRT AAAPDASVDG PGTLRDPRWP AALERLAAHG LGWDLRVPFW
HLGDAAALLA DAPGIDVVLE HAGLPWDRSE AGLARWRSGM EALAASPRVT VKISELGLRD
AVWNEADNAR IIRDTIAIFG WQRCLFASNF PVAGLRVSYP ALLRTFARAM ADLDDAARQA
IWHDNAMRVY RIA