Gene Bamb_5060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_5060 
Symbol 
ID4313951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp2079817 
End bp2081121 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content66% 
IMG OID638152903 
Productsodium:dicarboxylate symporter 
Protein accessionYP_776943 
Protein GI115359805 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.154454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA AGCACAACAT CACCCGGTAC ATCGTCATCG CGATGGCGCT GGGCATCGCC 
GTGGGCTACG CCTGTCATAG CGCGTTTCCC GACCCGAAAA TGGCCAGGGA AGTCGCCGGC
TACGTGTCGT TGCTGTCCGA CGTGTTCCTG CGGCTGATCA AGATGATCAT CGCGCCGCTG
GTGTTCGCGA CGCTGACGGT CGGCATCGCG CAGATGGGCG ACAGCGGGTC GGTCGGCCGC
GTGGGCGTGA AGGCGTTCGG CTGGTTCTTC ATCGCGTCAT TCACGTCGCT GGTGCTCGGT
CTCGTGACCG CGACGATCCT GAAGCCGGGC AGCCACCTGA GCCTGCCGCT GCCGGCCGCC
GATGCGACGC TGAACCTGAA GACGGCCGCA TTCACGCTGA AGGACTTCGT CGTCCACCTG
GTGCCGAAGT CGATCGCCGA GGCGATGGCG AACAACGAGA TCCTGCAGAT CGTCGTGTTC
TCGATCTTCT TCGGCACCGC GCTGTCCGCG CTCGGCGACG CCGGCAAGCG CCTGACCGGC
GTGATCGACG ATCTCGCGCA GGTCATGCTG AAGGTGACGG GCGCGGTGAT GTGGTTCGCG
CCGGTCGCCG TGTTTGCCGC GCTGGCGTCG ACGATCACGA CGGAAGGGCT CGGCATCCTG
CTCACGTTCG CGAAGTTCAT GGCGAGCTTC TATCTGGCGC TGGCGCTGCT GTGGGGCGTG
CTGACGCTCG CGGGCGTGAC GTTCCTCGGC AAGCGCGCGT TCACGCTGAT CCGCCTGATT
CGCGAGCCGT TCCTGCTGTC GTTCGCGACG GCGAGCTCCG AAGCCGCGTA TCCGAAGCTG
CTCGACGCGC TCGACCGGTT CGGCGTGAAC CGCAAGATCT CGAGCTTCGT GCTGCCGATC
GGGTATTCGT TCAACCTCGA CGGCTCGATG ATGTACTGCA CGTTCGCGGT GCTGTTCATC
TCGCAGGTGT ACGGGATCGA CCTGCCGCTC GGCACGCAGA TCACGATGCT GCTGATGCTG
ATGGTGACGT CGAAGGGGAT GGCCGGCGTG CCGCGCGCGT CGCTCGTCGT GATCGCGGCG
ACGCTCAGCC AGTTCCACCT GCCGGAAGCC GGGCTGCTGC TGATCATGGG TGTCGACATG
TTCCTCGACA TGGGGCGCTC GGCGACCAAC GCCGTCGGCA ACTCGATCGC GGCGGCCGTG
GTCGCGAAGT GGGAGGGCCA GCTCGGCGAT CCGCGCGACG ACGCGGATTC GGGCGGCGGC
GAGATCAAGC AGGTGGAGGT GCGTGAGACG GCGACGTCCG CGTGA
 
Protein sequence
MKKKHNITRY IVIAMALGIA VGYACHSAFP DPKMAREVAG YVSLLSDVFL RLIKMIIAPL 
VFATLTVGIA QMGDSGSVGR VGVKAFGWFF IASFTSLVLG LVTATILKPG SHLSLPLPAA
DATLNLKTAA FTLKDFVVHL VPKSIAEAMA NNEILQIVVF SIFFGTALSA LGDAGKRLTG
VIDDLAQVML KVTGAVMWFA PVAVFAALAS TITTEGLGIL LTFAKFMASF YLALALLWGV
LTLAGVTFLG KRAFTLIRLI REPFLLSFAT ASSEAAYPKL LDALDRFGVN RKISSFVLPI
GYSFNLDGSM MYCTFAVLFI SQVYGIDLPL GTQITMLLML MVTSKGMAGV PRASLVVIAA
TLSQFHLPEA GLLLIMGVDM FLDMGRSATN AVGNSIAAAV VAKWEGQLGD PRDDADSGGG
EIKQVEVRET ATSA