Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5060 |
Symbol | |
ID | 4313951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2079817 |
End bp | 2081121 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638152903 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_776943 |
Protein GI | 115359805 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.154454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGA AGCACAACAT CACCCGGTAC ATCGTCATCG CGATGGCGCT GGGCATCGCC GTGGGCTACG CCTGTCATAG CGCGTTTCCC GACCCGAAAA TGGCCAGGGA AGTCGCCGGC TACGTGTCGT TGCTGTCCGA CGTGTTCCTG CGGCTGATCA AGATGATCAT CGCGCCGCTG GTGTTCGCGA CGCTGACGGT CGGCATCGCG CAGATGGGCG ACAGCGGGTC GGTCGGCCGC GTGGGCGTGA AGGCGTTCGG CTGGTTCTTC ATCGCGTCAT TCACGTCGCT GGTGCTCGGT CTCGTGACCG CGACGATCCT GAAGCCGGGC AGCCACCTGA GCCTGCCGCT GCCGGCCGCC GATGCGACGC TGAACCTGAA GACGGCCGCA TTCACGCTGA AGGACTTCGT CGTCCACCTG GTGCCGAAGT CGATCGCCGA GGCGATGGCG AACAACGAGA TCCTGCAGAT CGTCGTGTTC TCGATCTTCT TCGGCACCGC GCTGTCCGCG CTCGGCGACG CCGGCAAGCG CCTGACCGGC GTGATCGACG ATCTCGCGCA GGTCATGCTG AAGGTGACGG GCGCGGTGAT GTGGTTCGCG CCGGTCGCCG TGTTTGCCGC GCTGGCGTCG ACGATCACGA CGGAAGGGCT CGGCATCCTG CTCACGTTCG CGAAGTTCAT GGCGAGCTTC TATCTGGCGC TGGCGCTGCT GTGGGGCGTG CTGACGCTCG CGGGCGTGAC GTTCCTCGGC AAGCGCGCGT TCACGCTGAT CCGCCTGATT CGCGAGCCGT TCCTGCTGTC GTTCGCGACG GCGAGCTCCG AAGCCGCGTA TCCGAAGCTG CTCGACGCGC TCGACCGGTT CGGCGTGAAC CGCAAGATCT CGAGCTTCGT GCTGCCGATC GGGTATTCGT TCAACCTCGA CGGCTCGATG ATGTACTGCA CGTTCGCGGT GCTGTTCATC TCGCAGGTGT ACGGGATCGA CCTGCCGCTC GGCACGCAGA TCACGATGCT GCTGATGCTG ATGGTGACGT CGAAGGGGAT GGCCGGCGTG CCGCGCGCGT CGCTCGTCGT GATCGCGGCG ACGCTCAGCC AGTTCCACCT GCCGGAAGCC GGGCTGCTGC TGATCATGGG TGTCGACATG TTCCTCGACA TGGGGCGCTC GGCGACCAAC GCCGTCGGCA ACTCGATCGC GGCGGCCGTG GTCGCGAAGT GGGAGGGCCA GCTCGGCGAT CCGCGCGACG ACGCGGATTC GGGCGGCGGC GAGATCAAGC AGGTGGAGGT GCGTGAGACG GCGACGTCCG CGTGA
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Protein sequence | MKKKHNITRY IVIAMALGIA VGYACHSAFP DPKMAREVAG YVSLLSDVFL RLIKMIIAPL VFATLTVGIA QMGDSGSVGR VGVKAFGWFF IASFTSLVLG LVTATILKPG SHLSLPLPAA DATLNLKTAA FTLKDFVVHL VPKSIAEAMA NNEILQIVVF SIFFGTALSA LGDAGKRLTG VIDDLAQVML KVTGAVMWFA PVAVFAALAS TITTEGLGIL LTFAKFMASF YLALALLWGV LTLAGVTFLG KRAFTLIRLI REPFLLSFAT ASSEAAYPKL LDALDRFGVN RKISSFVLPI GYSFNLDGSM MYCTFAVLFI SQVYGIDLPL GTQITMLLML MVTSKGMAGV PRASLVVIAA TLSQFHLPEA GLLLIMGVDM FLDMGRSATN AVGNSIAAAV VAKWEGQLGD PRDDADSGGG EIKQVEVRET ATSA
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