| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5050 |
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| Symbol | |
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| ID | 4313941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2068768 |
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| End bp | 2069472 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638152893 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_776933 |
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| Protein GI | 115359795 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCACC ATGCGGACGA CCCCGAACCC AAGCCGCTGC CGCTTACGGA AGAAGACGAC
CGTACGCTTG CCGCACGCGT CGCGAGCGGC GAGCGCGCGG CGTTCGAACA GCTGATGCGT
CGCTACAACC GGCGGCTCTA CCGGCTTGCA CGGGTGACGT TGCGCGACGA TGCCGAAGCC
GAGGATGCGC TGCAGGAGGC TTACCTCGCG GCGTTCCGCG CAATTCCGCG TTTTCGCGGC
GACGCGTCGC TGTCGACCTG GCTGTCGCGG CTCGTGCTCA ACGAGTGCTT GACGCGTCAG
CGCCGCGGCG CGCGGCGCGA CACGATCGCG CCGATGGTCG GGCTGTCGTC AATTGCCGAC
TTCGAGCGGG AAACCATGGA TGCAGACCAG AACGAATCGC CGGACCGTGC GCTGATGCGC
ACCGAACTGC GCACCTTACT GGAGCGCAGG CTCGATGCGT TGCCCGAAGC GTTTCGCATC
GTGTTCGTGA TGCGCTGCGT CGAGGAATTC AGCGTCGAGG AAACTGCCGA GTGCCTCGGC
ATACCCGAGG CGACGGTGCG CTCACGGCAT TTCCGGGCAA GGAGCATGCT GCGCGAGTCG
CTCGCACGGG ACATCGATCT GGCCGAGCGC GATGTGTTTT CGTTCGACGG GGAACGATGC
GATCGCATCG TGCTCGGCGT GCTGGCGAAA AGCGCTTCGC GTTGA
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| Protein sequence | MTHHADDPEP KPLPLTEEDD RTLAARVASG ERAAFEQLMR RYNRRLYRLA RVTLRDDAEA
EDALQEAYLA AFRAIPRFRG DASLSTWLSR LVLNECLTRQ RRGARRDTIA PMVGLSSIAD
FERETMDADQ NESPDRALMR TELRTLLERR LDALPEAFRI VFVMRCVEEF SVEETAECLG
IPEATVRSRH FRARSMLRES LARDIDLAER DVFSFDGERC DRIVLGVLAK SASR
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