| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_5034 |
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| Symbol | |
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| ID | 4313925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 2052879 |
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| End bp | 2053673 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638152877 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_776917 |
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| Protein GI | 115359779 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGC AACTGCAAGG CAAAACCGCG ATCGTCACGG GCGCTACCGC CGGAATCGGC
ATGGCTATCG CGCGAACGTT GGTCGGCGAG GGCGTGTCGG TCACGATCAC GGGGCGTCAC
CGCGACAAAC TCGACGAAGC CGTCGCTCAA ATTACCGCGG CAGTCCCGGA AGGCAGCGTA
CGCGGAATCG TTGCCGACGT GAGTGGCACG CGAGGCGTTG CCGAACTGAT CGACGCGCAG
CCGGATACGG ATATTCTCGT GAACAATCTC GGCTACTACG AAGCCAAGCC GTTCGCGGAA
ATCACCGATG ACGACTGGCT GCGAATGATC GACGTCAACG TGATGTCGGG GGTGCGACTG
TCACGCCATT ACTTTCCTCG CATGCTTGCG AAGAACTGGG GGCGTGTGAT CTTCATGTCC
AGCGAGGTCG GCGCGTTTAC GCCGCCGGAC ATGGTGCATT ACGGCGTCAG CAAATCGGCA
CAGCTCGCGG TCTCGCGCGG CATGGCCGAA CTGACGAAGG GTACGGGCGT GACCGTCAAC
AGCGTGCTGC CGTCCGCGAC GCGTTCCGAA GGCATCGTCG CGTATTTGCG GCAGACCGCG
CCGCGACCCG GCATGAGCGA TGCGGAAATC GAATCGCACT TCTTCGAGAC CTATCGCCCG
AGCTCGCTGA TCGCCCGCAT GATCGAAGCC GACGAGATCG CCGCCATGGT GGCCTTGCTG
GCCAGTCCGT TGGGCGCAGC ATCCAACGGC GCGGCGGTGC GCGTCGAAGG CGGCACCTTC
CGGTCGATTC TCTGA
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| Protein sequence | MDLQLQGKTA IVTGATAGIG MAIARTLVGE GVSVTITGRH RDKLDEAVAQ ITAAVPEGSV
RGIVADVSGT RGVAELIDAQ PDTDILVNNL GYYEAKPFAE ITDDDWLRMI DVNVMSGVRL
SRHYFPRMLA KNWGRVIFMS SEVGAFTPPD MVHYGVSKSA QLAVSRGMAE LTKGTGVTVN
SVLPSATRSE GIVAYLRQTA PRPGMSDAEI ESHFFETYRP SSLIARMIEA DEIAAMVALL
ASPLGAASNG AAVRVEGGTF RSIL
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