Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_5017 |
Symbol | |
ID | 4313908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2036743 |
End bp | 2037459 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638152860 |
Product | 3-oxoacid CoA-transferase, A subunit |
Protein accession | YP_776900 |
Protein GI | 115359762 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAACA AGATTTTCGA ATCGCTTCAA TCGGCGGTCG CGGACGTCCA CGACGGCGCG ACCATCATGA TCGGCGGCTT CGGCACGGCA GGCATGCCGT CCGAGCTGAT CGACGCGCTG ATCGAGCAGG GCGCGCGCGG CCTGACGATC GTCAACAACA ACGCGGGCAA CGGCGAGACG GGCCTCGCGG CGCTGCTCAA GGCGAAGCGG GTGCGCAAGA TCATCTGCTC GTTCCCGCGC CAGAGCGACT CGCAGGTGTT CGACGCGTTG TACCGCGCGG GCGAGATCGA ACTCGAGCTC GTGCCGCAGG GCAACCTCGC GGAGCGGATC CGCGCGGCGG GCGCCGGCAT CGGCGGCTTC TTCACGCCGA CGGGCTTCGG CACGAAGCTC GCGGAAGGCA AGGAAACGCG CGTGATCGAC GGCAAGTCGT ATGTGTTCGA GACGCCGATC CACGCCGATT TCGCGCTGGT GAAGGCGTAC AAGGGCGACC GCTGGGGCAA TCTCGTGTAT CGCAAGACCG CGCGCAACTT CGGGCCGATC ATGGCGAGCG CCGCGAAGGT CGCGATCGTG CAGGTGTCGG AAGTCGTGCC GCTCGGCGGG CTGAACCCGG AACACATCGT GACGCCTGGC ATTTTCGTGC AGCGTGTCGT CGAAGTGCCG CAGGCCGCAC ATGCGGCCGA GCTGGCTGCC GAACGTGCTG CATCCCAAGC CGCCTGA
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Protein sequence | MVNKIFESLQ SAVADVHDGA TIMIGGFGTA GMPSELIDAL IEQGARGLTI VNNNAGNGET GLAALLKAKR VRKIICSFPR QSDSQVFDAL YRAGEIELEL VPQGNLAERI RAAGAGIGGF FTPTGFGTKL AEGKETRVID GKSYVFETPI HADFALVKAY KGDRWGNLVY RKTARNFGPI MASAAKVAIV QVSEVVPLGG LNPEHIVTPG IFVQRVVEVP QAAHAAELAA ERAASQAA
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